RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 KMT2EQ8IZD2 1858 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 LAMA1P25391 3075 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 ZNF500O60304 480 aaPredicted RBP12.82□□□□□ -0.36
SMN2-203ENST00000380743 ALDH1A2O94788 518 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 PIGNO95427 931 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 MMP2P08253 660 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
SMN2-203ENST00000380743 PAFAH1B1P43034 410 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 PSMD8P48556 350 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
SMN2-203ENST00000380743 CST6Q15828 149 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 ANKRD20A3Q5VUR7 823 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 ZNF776Q68DI1 518 aaPredicted RBP12.82□□□□□ -0.36
SMN2-203ENST00000380743 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 DSG4Q86SJ6 1040 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 RASSF3Q86WH2 238 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 CAMK1DQ8IU85 385 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 PGBD3Q8N328 593 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 KIF18AQ8NI77 898 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 PIP4K2CQ8TBX8 421 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 RTP4Q96DX8 246 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 SIPA1Q96FS4 1042 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 CPEB1Q9BZB8 566 aaKnown RBP12.82□□□□□ -0.36
SMN2-203ENST00000380743 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMN2-203ENST00000380743 EBF1Q9UH73 591 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 TRHDEQ9UKU6 1024 aa12.82□□□□□ -0.36
SMN2-203ENST00000380743 ZNF318Q5VUA4 2279 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 F5H423 210 aaPredicted RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 MID1O15344 667 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 PHF2O75151 1096 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 GCATO75600 419 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 IFNB1P01574 187 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 PRNPP04156 253 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 UGT2B4P06133 528 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 ETS1P14921 441 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 NFKB1P19838 968 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 CES1P23141 567 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 HOXA6P31267 233 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 SLC8A1P32418 973 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 COILP38432 576 aaPredicted RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 CD86P42081 329 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 AP1S1P61966 158 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 RAD51Q06609 339 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 CCDC137Q6PK04 289 aaKnown RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 KIAA1324Q6UXG2 1013 aaKnown RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 GDPD4Q6W3E5 623 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 AADATQ8N5Z0 425 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 GLIS1Q8NBF1 620 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 SPATA22Q8NHS9 363 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 IMP4Q96G21 291 aaKnown RBP12.81□□□□□ -0.36
SMN2-203ENST00000380743 LRIG1Q96JA1 1093 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 TPSD1Q9BZJ3 242 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 SLC25A51Q9H1U9 297 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 HAUS2Q9NVX0 235 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 CDC23Q9UJX2 597 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 PCDHGC4Q9Y5F7 938 aa12.81□□□□□ -0.36
SMN2-203ENST00000380743 PLK4O00444 970 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 KPNA3O00505 521 aaPredicted RBP12.8□□□□□ -0.36
SMN2-203ENST00000380743 TRAFD1O14545 582 aaPredicted RBP12.8□□□□□ -0.36
SMN2-203ENST00000380743 OPHN1O60890 802 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 ZNF189O75820 626 aaPredicted RBP12.8□□□□□ -0.36
SMN2-203ENST00000380743 ADH1BP00325 375 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 DNTTP04053 509 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 MAPK8P45983 427 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 RALGPS1Q5JS13 557 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 FAM46CQ5VWP2 391 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 PRPF39Q86UA1 669 aaKnown RBP12.8□□□□□ -0.36
SMN2-203ENST00000380743 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 ARRDC3Q96B67 414 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 KLHL32Q96NJ5 620 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 TUBGCP5Q96RT8 1024 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 RBM15Q96T37 977 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMN2-203ENST00000380743 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 OSBPL1AQ9BXW6 950 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 DDX47Q9H0S4 455 aaKnown RBP12.8□□□□□ -0.36
SMN2-203ENST00000380743 PABPC3Q9H361 631 aaKnown RBP12.8□□□□□ -0.36
SMN2-203ENST00000380743 ATP13A3Q9H7F0 1226 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 SERGEFQ9UGK8 458 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 FBXO4Q9UKT5 387 aa12.8□□□□□ -0.36
SMN2-203ENST00000380743 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.79□□□□□ -0.36
SMN2-203ENST00000380743 C1QTNF3-AMACRE9PGA6 284 aa12.79□□□□□ -0.36
SMN2-203ENST00000380743 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
SMN2-203ENST00000380743 MT-CYBP00156 380 aaPredicted RBP12.79□□□□□ -0.36
SMN2-203ENST00000380743 SERPINF2P08697 491 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms