RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ASGR1P07306 291 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 SP100P23497 879 aaPredicted RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 NUDT2P50583 147 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 RAB27AP51159 221 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 UGP2Q16851 508 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 RBM20Q5T481 1227 aaKnown RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 LPCAT4Q643R3 524 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 CNSTQ6PJW8 725 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 DHDDSQ86SQ9 333 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 CATSPER2Q96P56 530 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 TRIM62Q9BVG3 475 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 GABRQQ9UN88 632 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 MANSC4A6NHS7 340 aaPredicted RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 UBTFL6P0CB48 400 aaPredicted RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 CRABP2P29373 138 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 PRDX6P30041 224 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 CRHR2Q13324 411 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 MAPRE1Q15691 268 aaKnown RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 AFMIDQ63HM1 303 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 NXNQ6DKJ4 435 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 AAGABQ6PD74 315 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 ZNF280BQ86YH2 543 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 TXNDC5Q8NBS9 432 aaKnown RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 C2CD4AQ8NCU7 369 aaPredicted RBP20.27■□□□□ 0.84
EBF1-202ENST00000380654 HEXDCQ8WVB3 486 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 YIPF3Q9GZM5 350 aa20.27■□□□□ 0.84
EBF1-202ENST00000380654 MTTPP55157 894 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 WNT3AP56704 352 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 PRKAA1Q13131 559 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 DDR2Q16832 855 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 EML3Q32P44 896 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 GATA6Q92908 595 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 KLHL5Q96PQ7 755 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 DDX50Q9BQ39 737 aaKnown RBP20.26■□□□□ 0.83
EBF1-202ENST00000380654 PPP1R12CQ9BZL4 782 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 FBXO5Q9UKT4 447 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 J3KR12 359 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 NSUN2Q08J23 767 aaKnown RBP eCLIP20.26■□□□□ 0.83
EBF1-202ENST00000380654 IHHQ14623 411 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 LBRQ14739 615 aaKnown RBP20.26■□□□□ 0.83
EBF1-202ENST00000380654 PHC3Q8NDX5 983 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 NT5MQ9NPB1 228 aa20.26■□□□□ 0.83
EBF1-202ENST00000380654 TRMT13Q9NUP7 481 aaKnown RBP20.26■□□□□ 0.83
EBF1-202ENST00000380654 DOCK4Q8N1I0 1966 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 PEX11BO96011 259 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 HAPLN1P10915 354 aaPredicted RBP20.25■□□□□ 0.83
EBF1-202ENST00000380654 COL6A2P12110 1019 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 CD151P48509 253 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 MLLT6P55198 1093 aaPredicted RBP20.25■□□□□ 0.83
EBF1-202ENST00000380654 KCNA10Q16322 511 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 FAM219BQ5XKK7 198 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 TIGD7Q6NT04 549 aaPredicted RBP20.25■□□□□ 0.83
EBF1-202ENST00000380654 RPS27LQ71UM5 84 aaKnown RBP20.25■□□□□ 0.83
EBF1-202ENST00000380654 RNF135Q8IUD6 432 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 GPR152Q8TDT2 470 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 OLFM1Q99784 485 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 UBE2OQ9C0C9 1292 aaKnown RBP20.25■□□□□ 0.83
EBF1-202ENST00000380654 SUDS3Q9H7L9 328 aaPredicted RBP20.25■□□□□ 0.83
EBF1-202ENST00000380654 CCL22O00626 93 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 CNTN5O94779 1100 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 GRK4P32298 578 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 USP46P62068 366 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 CSHL1Q14406 222 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 OR52E8Q6IFG1 317 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 NEPROQ6NW34 567 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 KDELC1Q6UW63 502 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 HMCESQ96FZ2 354 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 CNDP1Q96KN2 507 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 SPC25Q9HBM1 224 aa20.25■□□□□ 0.83
EBF1-202ENST00000380654 ADAMTS4O75173 837 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 HNRNPLP14866 589 aaKnown RBP eCLIP20.24■□□□□ 0.83
EBF1-202ENST00000380654 CPB1P15086 417 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 ARSAP15289 507 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 PEX2P28328 305 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 MSX2P35548 267 aaPredicted RBP20.24■□□□□ 0.83
EBF1-202ENST00000380654 ITKQ08881 620 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 SLC10A7Q0GE19 358 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 ALFQ53S48 1182 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 KIAA0930Q6ICG6 404 aaPredicted RBP20.24■□□□□ 0.83
EBF1-202ENST00000380654 ADGRG6Q86SQ4 1221 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 KDM1BQ8NB78 822 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 UPF3AQ9H1J1 476 aaKnown RBP20.24■□□□□ 0.83
EBF1-202ENST00000380654 MRPL46Q9H2W6 279 aaKnown RBP20.24■□□□□ 0.83
EBF1-202ENST00000380654 EBF3Q9H4W6 596 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 POMKQ9H5K3 350 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 ZNF385DQ9H6B1 395 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 MRM3Q9HC36 420 aaKnown RBP20.24■□□□□ 0.83
EBF1-202ENST00000380654 SLC24A3Q9HC58 644 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 SCOCQ9UIL1 159 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 CDYLQ9Y232 598 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 FIS1Q9Y3D6 152 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 RGSL1A5PLK6 1076 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 THRAP10827 490 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 RAG1P15918 1043 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 PAMP19021 973 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 KCNA5P22460 613 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 PPARGP37231 505 aaPredicted RBP20.24■□□□□ 0.83
EBF1-202ENST00000380654 PEX19P40855 299 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 CD86P42081 329 aa20.24■□□□□ 0.83
EBF1-202ENST00000380654 SFT2D3Q587I9 215 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms