RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SMIM10L2AP0DMW4 78 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 SMIM10L2BP0DMW5 78 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 RPL9P32969 192 aaKnown RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 PTDSS1P48651 473 aaKnown RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 LIPMQ5VYY2 423 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 CXCL17Q6UXB2 119 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 CCDC149Q6ZUS6 474 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 TRABD2AQ86V40 505 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 DIABLOQ9NR28 239 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 RPS6KA6Q9UK32 745 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 NTSP30990 170 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 MRPS6P82932 125 aaKnown RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 C11orf88Q6PI97 169 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 CYP20A1Q6UW02 462 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 DHDDSQ86SQ9 333 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 ELMO1Q92556 727 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 MTFMTQ96DP5 389 aaKnown RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 MARK4Q96L34 752 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 DGCR6LQ9BY27 220 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 NTRK1P04629 796 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ALOX12P18054 663 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 POLD2P49005 469 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 PRKG2Q13237 762 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 POTEHQ6S545 545 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ADAMTSL2Q86TH1 951 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ENKURQ8TC29 256 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 SLCO1B3Q9NPD5 702 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 CNGB3Q9NQW8 809 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 KLHL1Q9NR64 748 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 C3orf18Q9UK00 162 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 FBXO10Q9UK96 956 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 CHKBQ9Y259 395 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 SLC9A3R1O14745 358 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ENTPD5O75356 428 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 CXCR2P25025 360 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 PBX1P40424 430 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 IDH2P48735 452 aaKnown RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ATP6V0D1P61421 351 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 PPP1R16AQ96I34 528 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 PWWP2AQ96N64 755 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 XPR1Q9UBH6 696 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 HGFP14210 728 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 GRM5P41594 1212 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 CRATP43155 626 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 MRPS5P82675 430 aaKnown RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ZNF57Q68EA5 555 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 MYLPFQ96A32 169 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 NDNQ99608 321 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 OMDQ99983 421 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ATP6V1HQ9UI12 483 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 TMEM191CA6NGB0 347 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 BNIP2Q12982 314 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 DCTN2Q13561 401 aaKnown RBP16.18■□□□□ 0.18
COL2A1-202ENST00000380518 TMC5Q6UXY8 1006 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 B3GNT6Q6ZMB0 384 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 ATP13A3Q9H7F0 1226 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 NCKAP1Q9Y2A7 1128 aa16.18■□□□□ 0.18
COL2A1-202ENST00000380518 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 NDUFB5O43674 189 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 ABL2P42684 1182 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 DGCR6Q14129 220 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 GATAD2AQ86YP4 633 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 NUAK2Q9H093 628 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 SNX15Q9NRS6 342 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 VAV3Q9UKW4 847 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 FZD1Q9UP38 647 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 IRF6O14896 467 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 EDF1O60869 148 aaKnown RBP16.17■□□□□ 0.18
COL2A1-202ENST00000380518 TSC22D2O75157 780 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 KRT36O76013 467 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 CSH1P0DML2 217 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 CSH2P0DML3 217 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 ATP6V1C1P21283 382 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 CDC42P60953 191 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 ARSHQ5FYA8 562 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 GPRIN3Q6ZVF9 776 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 PURBQ96QR8 312 aaKnown RBP16.17■□□□□ 0.18
COL2A1-202ENST00000380518 C1orf50Q9BV19 199 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 SLITRK2Q9H156 845 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 EFCAB10A6NFE3 127 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 INSCQ1MX18 579 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 ZNF618Q5T7W0 954 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 TXNDC11Q6PKC3 985 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 METTL3Q86U44 580 aaKnown RBP16.17■□□□□ 0.18
COL2A1-202ENST00000380518 DYTNA2CJ06 578 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 SLC15A5A6NIM6 579 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 QSOX1O00391 747 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 HDCP19113 662 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 AIF1P55008 147 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 SPIDRQ14159 915 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 IKBKEQ14164 716 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 ZNF549Q6P9A3 640 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 PACS1Q6VY07 963 aa16.17■□□□□ 0.18
COL2A1-202ENST00000380518 TSPAN14Q8NG11 270 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms