RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SGK2Q9HBY8 427 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 NT5MQ9NPB1 228 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 RBM22Q9NW64 420 aaKnown RBP eCLIP12.08□□□□□ -0.482e-8■■■■■ 27
PCNA-201ENST00000379143 EVLQ9UI08 416 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 ZKSCAN5Q9Y2L8 839 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 PLXND1Q9Y4D7 1925 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 SHROOM3Q8TF72 1996 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 IGHV1OR15-9A0A0B4J2B8 117 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 A0A1W2PP55 124 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 A0A1W2PQ67 120 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 H7C0C1 242 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 KCNK1O00180 336 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 MAP3K13O43283 966 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 RNASEH2AO75792 299 aaKnown RBP12.07□□□□□ -0.48
PCNA-201ENST00000379143 JCHAINP01591 159 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 RBP3P10745 1247 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 ITGB7P26010 798 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 SERPINA4P29622 427 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 CD6P30203 668 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 ATP5OP48047 213 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 SCNN1BP51168 640 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 EIF3EP60228 445 aaKnown RBP12.07□□□□□ -0.48
PCNA-201ENST00000379143 BCL2L1Q07817 233 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 ZNF805Q5CZA5 627 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 ALG1LQ6GMV1 187 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 CEP68Q76N32 757 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 HDDC3Q8N4P3 179 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 OR6K2Q8NGY2 324 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 HTR3CQ8WXA8 447 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 RLN3Q8WXF3 142 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 NAP1L3Q99457 506 aaPredicted RBP12.07□□□□□ -0.48
PCNA-201ENST00000379143 HDAC8Q9BY41 377 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 BTBD1Q9H0C5 482 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 HOMER3Q9NSC5 361 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 SARDHQ9UL12 918 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 CYP8B1Q9UNU6 501 aa12.07□□□□□ -0.48
PCNA-201ENST00000379143 EML5Q05BV3 1969 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 BCLAF3A2AJT9 711 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 MUSKO15146 869 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 INSIG1O15503 277 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 HRO43593 1189 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 CEP104O60308 925 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 SOCS5O75159 536 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 NDUFS2O75306 463 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 STK10O94804 968 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 RHOBTB1O94844 696 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 FGGP02679 453 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 ATP1A1P05023 1023 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 UGT2B4P06133 528 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 PRLRP16471 622 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 TCP1P17987 556 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 CR2P20023 1033 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 CA4P22748 312 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 CXCR5P32302 372 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 DRD3P35462 400 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 RGRP47804 291 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 SUOXP51687 545 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 NEK3P51956 506 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 ITKQ08881 620 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 SIM2Q14190 667 aaPredicted RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 ELF2Q15723 593 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 CFAP58Q5T655 872 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 FBXL19Q6PCT2 694 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 NCEH1Q6PIU2 408 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 BRAT1Q6PJG6 821 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 ERN2Q76MJ5 926 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 AADATQ8N5Z0 425 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 RAB7BQ96AH8 199 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 ZC3H10Q96K80 434 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 OSBPL9Q96SU4 736 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 SUV39H2Q9H5I1 410 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 WSB2Q9NYS7 404 aaPredicted RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 SEPT10Q9P0V9 454 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 DKK3Q9UBP4 350 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 TRHDEQ9UKU6 1024 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 RAB23Q9ULC3 237 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 TTC7AQ9ULT0 858 aaPredicted RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 TPX2Q9ULW0 747 aaKnown RBP12.06□□□□□ -0.48
PCNA-201ENST00000379143 SNX12Q9UMY4 172 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 TTLL3Q9Y4R7 772 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 R4GN57 208 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 FANCMQ8IYD8 2048 aa12.06□□□□□ -0.48
PCNA-201ENST00000379143 CTAGE9A4FU28 777 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 CFAP69A5D8W1 941 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 LRRC72A6NJI9 287 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 HLA-DQB2P05538 268 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 SERPINF2P08697 491 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 RBL1P28749 1068 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 GKP32189 559 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 ID4P47928 161 aa12.05□□□□□ -0.48
PCNA-201ENST00000379143 MAXP61244 160 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms