RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RFPL1O75677 317 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 CSPG5O95196 566 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 LRG1P02750 347 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 TROVE2P10155 538 aaKnown RBP eCLIP19.66■□□□□ 0.74
SSU72-204ENST00000378726 WNT3AP56704 352 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 ERVFC1P60507 584 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 GNA12Q03113 381 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 LBRQ14739 615 aaKnown RBP19.66■□□□□ 0.74
SSU72-204ENST00000378726 PCSK7Q16549 785 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 PCID2Q5JVF3 399 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 PACS1Q6VY07 963 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 OR52K2Q8NGK3 314 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 MANSC1Q9H8J5 431 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 SAR1AQ9NR31 198 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 SLC4A7Q9Y6M7 1214 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 LIN7AO14910 233 aaPredicted RBP19.66■□□□□ 0.74
SSU72-204ENST00000378726 TM9SF1O15321 606 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 TLL1O43897 1013 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 ADH1AP07327 375 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 CNTFP26441 200 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 GABRR2P28476 465 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 CD86P42081 329 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 SGSHP51688 502 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 NAB1Q13506 487 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 IL31Q6EBC2 164 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 CAPRIN2Q6IMN6 1127 aaKnown RBP19.66■□□□□ 0.74
SSU72-204ENST00000378726 PSRC1Q6PGN9 363 aaPredicted RBP19.66■□□□□ 0.74
SSU72-204ENST00000378726 RASSF3Q86WH2 238 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 OR7D4Q8NG98 312 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 ZNF398Q8TD17 642 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 ZFRQ96KR1 1074 aaKnown RBP19.66■□□□□ 0.74
SSU72-204ENST00000378726 TCF25Q9BQ70 676 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 KIFC1Q9BW19 673 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 ARL8BQ9NVJ2 186 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 PSAT1Q9Y617 370 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 A0A0G2JND7 137 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 TTC24A2A3L6 582 aaPredicted RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 LUC7L3O95232 432 aaKnown RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 NMBRP28336 390 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 DSC2Q02487 901 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 TNK2Q07912 1038 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 ZNF177Q13360 481 aaPredicted RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 FRG1Q14331 258 aaKnown RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 POU6F1Q14863 301 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 KDELC1Q6UW63 502 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 PGBD5Q8N414 524 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 KREMEN2Q8NCW0 462 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 PRR11Q96HE9 360 aaPredicted RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 ZNF778Q96MU6 729 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 DDX50Q9BQ39 737 aaKnown RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 SPON2Q9BUD6 331 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 CADM1Q9BY67 442 aaKnown RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 HEY2Q9UBP5 337 aa19.65■□□□□ 0.74
SSU72-204ENST00000378726 CORO1CQ9ULV4 474 aaPredicted RBP19.65■□□□□ 0.74
SSU72-204ENST00000378726 C8AP07357 584 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 BMPR1AP36894 532 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 PTDSS1P48651 473 aaKnown RBP19.64■□□□□ 0.74
SSU72-204ENST00000378726 HSP90AA5PQ58FG0 334 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 PKN3Q6P5Z2 889 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 CCDC149Q6ZUS6 474 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 GAREM2Q75VX8 874 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 HS6ST3Q8IZP7 471 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 SP7Q8TDD2 431 aaPredicted RBP19.64■□□□□ 0.74
SSU72-204ENST00000378726 APOPT1Q96IL0 206 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 VPS11Q9H270 941 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 VPS45Q9NRW7 570 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 TXNDC16Q9P2K2 825 aa19.64■□□□□ 0.74
SSU72-204ENST00000378726 CCDC78A2IDD5 438 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 COPEO14579 308 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 SCAMP3O14828 347 aaKnown RBP19.64■□□□□ 0.73
SSU72-204ENST00000378726 MMP2P08253 660 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 ZXDBP98169 803 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 KHDC1Q4VXA5 237 aaKnown RBP19.64■□□□□ 0.73
SSU72-204ENST00000378726 TMCO4Q5TGY1 634 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 ANO7Q6IWH7 933 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 POTEHQ6S545 545 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 C7orf61Q8IZ16 206 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 ARRDC2Q8TBH0 407 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 MRPS31Q92665 395 aaKnown RBP19.64■□□□□ 0.73
SSU72-204ENST00000378726 OSBPL1AQ9BXW6 950 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 EMILIN2Q9BXX0 1053 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 PDFQ9HBH1 243 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 C20orf96Q9NUD7 363 aaPredicted RBP19.64■□□□□ 0.73
SSU72-204ENST00000378726 KIAA1671Q9BY89 1806 aa19.64■□□□□ 0.73
SSU72-204ENST00000378726 A6NHS1 94 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 SYN1P17600 705 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 CHRNA4P43681 627 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 NEK3P51956 506 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 CYP4F8P98187 520 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 IHHQ14623 411 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 TEDDM1Q5T9Z0 273 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 TIFABQ6ZNK6 161 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.63■□□□□ 0.73
SSU72-204ENST00000378726 SLC25A41Q8N5S1 370 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 HERVK_113Q902F9 699 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 PTCD3Q96EY7 689 aaKnown RBP19.63■□□□□ 0.73
SSU72-204ENST00000378726 AGAP2Q99490 1192 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 SLC13A1Q9BZW2 595 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 KCNK13Q9HB14 408 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms