RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TSTD2Q5T7W7 516 aa18.39■□□□□ 0.53
TDP2-202ENST00000378198 KIAA0930Q6ICG6 404 aaPredicted RBP18.39■□□□□ 0.53
TDP2-202ENST00000378198 PIWIL4Q7Z3Z4 852 aaKnown RBP18.39■□□□□ 0.53
TDP2-202ENST00000378198 CCNYL1Q8N7R7 359 aa18.39■□□□□ 0.53
TDP2-202ENST00000378198 MAELQ96JY0 434 aaKnown RBP18.39■□□□□ 0.53
TDP2-202ENST00000378198 FTHL17Q9BXU8 183 aa18.39■□□□□ 0.53
TDP2-202ENST00000378198 PRKD2Q9BZL6 878 aa18.39■□□□□ 0.53
TDP2-202ENST00000378198 TREX1Q9NSU2 369 aa18.39■□□□□ 0.53
TDP2-202ENST00000378198 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.39■□□□□ 0.53
TDP2-202ENST00000378198 TBC1D30Q9Y2I9 924 aa18.39■□□□□ 0.53
TDP2-202ENST00000378198 ME2P23368 584 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 ATP5F1P24539 256 aaPredicted RBP18.38■□□□□ 0.53
TDP2-202ENST00000378198 THOP1P52888 689 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 SLC12A2P55011 1212 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PURAQ00577 322 aaKnown RBP18.38■□□□□ 0.53
TDP2-202ENST00000378198 SATB1Q01826 763 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 FOLH1Q04609 750 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 ZNF460Q14592 562 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PDK3Q15120 406 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PDCD2Q16342 344 aaPredicted RBP18.38■□□□□ 0.53
TDP2-202ENST00000378198 ARMC3Q5W041 872 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 TMEM198Q66K66 360 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 CATSPER1Q8NEC5 780 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PTPN18Q99952 460 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 FSD1LQ9BXM9 530 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 WDR41Q9HAD4 459 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 ABCC13Q9NSE7 274 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 MRGBPQ9NV56 204 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 CLIC5Q9NZA1 410 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PACSIN3Q9UKS6 424 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 AP1G1O43747 822 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PAGE1O75459 146 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 ENO3P13929 434 aaPredicted RBP18.38■□□□□ 0.53
TDP2-202ENST00000378198 CNGA3Q16281 694 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 RARS2Q5T160 578 aaKnown RBP18.38■□□□□ 0.53
TDP2-202ENST00000378198 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 MANEALQ5VSG8 457 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 CEP70Q8NHQ1 597 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 DLG3Q92796 817 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 LRGUKQ96M69 825 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 PAAF1Q9BRP4 392 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 RBM22Q9NW64 420 aaKnown RBP eCLIP18.38■□□□□ 0.53
TDP2-202ENST00000378198 SLC2A6Q9UGQ3 507 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 FBXO5Q9UKT4 447 aa18.38■□□□□ 0.53
TDP2-202ENST00000378198 TXNDC9O14530 226 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 DENRO43583 198 aaKnown RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 CYP11A1P05108 521 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 JUNP05412 331 aaKnown RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 HLA-DQB2P05538 268 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 XRCC1P18887 633 aaPredicted RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 YY1P25490 414 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 CCR1P32246 355 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 CHN2P52757 468 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 TAS2R39P59534 338 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 FSCN1Q16658 493 aaKnown RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 SH2D4BQ5SQS7 431 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 BTBD8Q5XKL5 378 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 RANBP10Q6VN20 620 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 AGMOQ6ZNB7 445 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 KIAA0408Q6ZU52 694 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 GABPB2Q8TAK5 448 aaPredicted RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 HEXDCQ8WVB3 486 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 CCDC126Q96EE4 140 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 DCUN1D1Q96GG9 259 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 ZNF419Q96HQ0 510 aaPredicted RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 OMDQ99983 421 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 TRPV6Q9H1D0 765 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 Q9H521 79 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 POMKQ9H5K3 350 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 TBC1D13Q9NVG8 400 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 COPG1Q9Y678 874 aaKnown RBP18.37■□□□□ 0.53
TDP2-202ENST00000378198 MYO16Q9Y6X6 1858 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 SDHDO14521 159 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 CFLARO15519 480 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 PMPCBO75439 489 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 CEACAM7Q14002 265 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 ADGRE1Q14246 886 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 ZNF470Q6ECI4 717 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 LRRC49Q8IUZ0 686 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 FAR2Q96K12 515 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 MRGPRX2Q96LB1 330 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 PKMYT1Q99640 499 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 SPATA16Q9BXB7 569 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 TMLHEQ9NVH6 421 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 DSEQ9UL01 958 aa18.37■□□□□ 0.53
TDP2-202ENST00000378198 UTRNP46939 3433 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 CAPN8A6NHC0 703 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
TDP2-202ENST00000378198 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
TDP2-202ENST00000378198 CPB1P15086 417 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 MAPRE1Q15691 268 aaKnown RBP18.36■□□□□ 0.53
TDP2-202ENST00000378198 SPRYD7Q5W111 196 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 UGT2A3Q6UWM9 527 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 TRIM67Q6ZTA4 783 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 MRPL10Q7Z7H8 261 aaKnown RBP18.36■□□□□ 0.53
TDP2-202ENST00000378198 SPATA6LQ8N4H0 392 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 MARVELD2Q8N4S9 558 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 AFAP1L2Q8N4X5 818 aa18.36■□□□□ 0.53
TDP2-202ENST00000378198 TXNDC5Q8NBS9 432 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms