RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RNASEH2AO75792 299 aaKnown RBP16.46■□□□□ 0.23
RGP1-201ENST00000378078 CALB2P22676 271 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 RAD23AP54725 363 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.46■□□□□ 0.23
RGP1-201ENST00000378078 KCNT2Q6UVM3 1135 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 KAT5Q92993 513 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 GAL3ST4Q96RP7 486 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 MCCC2Q9HCC0 563 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 DNPEPQ9ULA0 475 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 CAPN6Q9Y6Q1 641 aa16.46■□□□□ 0.23
RGP1-201ENST00000378078 STX16-NPEPL1H3BU86 382 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 STX16O14662 325 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 ZNF432O94892 652 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 SMIM10L2AP0DMW4 78 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 SMIM10L2BP0DMW5 78 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 AQP1P29972 269 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 SCTRP47872 440 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 NEK3P51956 506 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 VGLL4Q14135 290 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 CAPSLQ8WWF8 208 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 MYLPFQ96A32 169 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 COPS4Q9BT78 406 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 RNF121Q9H920 327 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 IKZF3Q9UKT9 509 aa16.46■□□□□ 0.22
RGP1-201ENST00000378078 GPR75-ASB3A0A0A6YYF3 556 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 MAGEB3O15480 346 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 FUT4P22083 530 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ATXN1P54253 815 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 MRPS22P82650 360 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 FAM91A1Q658Y4 838 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ACTL9Q8TC94 416 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 NDRG1Q92597 394 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 PHF24Q9UPV7 400 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 CLOCKO15516 846 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ITPKAP23677 461 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 CRABP2P29373 138 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 FSTL1Q12841 308 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 UBXN2BQ14CS0 331 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 FAM183BPQ6ZVS7 135 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 KRT74Q7RTS7 529 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ZCCHC10Q8TBK6 192 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 PIGUQ9H490 435 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 INTS7Q9NVH2 962 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 NT5EP21589 574 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 TUFMP49411 452 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 PGDP52209 483 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 PCDH1Q08174 1060 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
RGP1-201ENST00000378078 KCNA5P22460 613 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 POLNQ7Z5Q5 900 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 FNDC11Q9BVV2 318 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 MRPL9Q9BYD2 267 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 ZNF214Q9UL59 606 aaPredicted RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 PTPRJQ12913 1337 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 A8MU76 341 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 LDLRP01130 860 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 DBTP11182 482 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 MAGP20916 626 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 GABRR2P28476 465 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 HNRNPH1P31943 449 aaKnown RBP16.45■□□□□ 0.22
RGP1-201ENST00000378078 RAB27AP51159 221 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 RABGGTBP53611 331 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 CXCL9Q07325 125 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ACTRT2Q8TDY3 377 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 UGT2B28Q9BY64 529 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 ABCC13Q9NSE7 274 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 TMLHEQ9NVH6 421 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 SPATA31E1Q6ZUB1 1445 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 A0A087X1B8 175 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 PPM1AP35813 382 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 SLC20A2Q08357 652 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 HECTD3Q5T447 861 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 JAZF1Q86VZ6 243 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 VPS4AQ9UN37 437 aa16.45■□□□□ 0.22
RGP1-201ENST00000378078 TTC37Q6PGP7 1564 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ELFN1P0C7U0 828 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 PRKG2Q13237 762 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 UAP1L1Q3KQV9 507 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 TSHZ1Q6ZSZ6 1077 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ZNF611Q8N823 705 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 CDYL2Q8N8U2 506 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 C7orf57Q8NEG2 295 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 TSEN15Q8WW01 171 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 CLN6Q9NWW5 311 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ZDHHC9Q9Y397 364 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 AKAP3O75969 853 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 UBOX5O94941 541 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 ARHGDIBP52566 201 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 CBX2Q14781 532 aaPredicted RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 FBXO48Q5FWF7 155 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 GPR158Q5T848 1215 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 CYB5D1Q6P9G0 228 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 FAM9CQ8IZT9 166 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ANKFN1Q8N957 763 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 EPS8L2Q9H6S3 715 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 TRMT13Q9NUP7 481 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms