RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 VTA1Q9NP79 307 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CATSPERZQ9NTU4 200 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SMPD3Q9NY59 655 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ADAM30Q9UKF2 790 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 MYH7BA7E2Y1 1941 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 C17orf102A2RUQ5 167 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 F5H5T6 163 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 AZIN1O14977 448 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ASPAP45381 313 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PIK3CGP48736 1102 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 GLUD2P49448 558 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SNAPC2Q13487 334 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 TAF5Q15542 800 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 GRIK4Q16099 956 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 TIMM50Q3ZCQ8 353 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SGO1Q5FBB7 561 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PKN3Q6P5Z2 889 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 TMC5Q6UXY8 1006 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 LUZP2Q86TE4 346 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PTGR2Q8N8N7 351 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 GPRC5AQ8NFJ5 357 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CMASQ8NFW8 434 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ASB9Q96DX5 294 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SERPINB11Q96P15 392 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 HGH1Q9BTY7 390 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 DGCR6LQ9BY27 220 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 MTFR1LQ9H019 292 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 MUC3BQ9H195 1237 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 EPB41L4BQ9H329 900 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 STMN3Q9NZ72 180 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SUCOQ9UBS9 1254 aaKnown RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 FARP1Q9Y4F1 1045 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 TRAF6Q9Y4K3 522 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 MAFBQ9Y5Q3 323 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 E7ESA3 106 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 RPLP2P05387 115 aaKnown RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 RRM2P31350 389 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 GRM5P41594 1212 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SYTL3Q4VX76 610 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF549Q6P9A3 640 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 STARD8Q92502 1023 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ADGRE3Q9BY15 652 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 C6orf62Q9GZU0 229 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 RIBC2Q9H4K1 309 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CAB39LQ9H9S4 337 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 IGSF9Q9P2J2 1179 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 A0A0J9YYE9 177 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SERPINI2O75830 405 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 KRT6AP02538 564 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 KRT6BP04259 564 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 IL12AP29459 219 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SLC7A1P30825 629 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ABCG1P45844 678 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 KRT6CP48668 564 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 NOVP48745 357 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CDK9P50750 372 aaKnown RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 FAM91A1Q658Y4 838 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CATSPERGQ6ZRH7 1159 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 RIOX2Q8IUF8 465 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 KBTBD8Q8NFY9 601 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 LRTOMTQ8WZ04 291 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 FOPNLQ96NB1 174 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 NOL6Q9H6R4 1146 aaKnown RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CD320Q9NPF0 282 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SIRPGQ9P1W8 387 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 WDR37Q9Y2I8 494 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 TCRBV7S3A2A0A539 114 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 HNRNPCL2B2RXH8 293 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PAPSS1O43252 624 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 TFEBP19484 476 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 S100A1P23297 94 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 RXRBP28702 533 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 MRPS5P82675 430 aaKnown RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PGS1Q32NB8 556 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PDCD4Q53EL6 469 aaKnown RBP8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CCNYL2Q5T2Q4 361 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 OR8H2Q8N162 312 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CLEC4DQ8WXI8 215 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 ABHD8Q96I13 439 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CIB1Q99828 191 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 PIF1Q9H611 641 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 SELENONQ9NZV5 590 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 GNPTGQ9UJJ9 305 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 CDH9Q9ULB4 789 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 LAMB1P07942 1786 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 NUP98P52948 1817 aa8.84□□□□□ -0.99
PCDH9-202ENST00000377865 A0A1B0GW55 424 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 KCNU1A8MYU2 1149 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MFSD11O43934 449 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 IPO13O94829 963 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 SEC24AO95486 1093 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4L2P0CJ85 424 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4L3P0CJ86 424 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4L4P0CJ87 422 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4L5P0CJ88 424 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4L6P0CJ89 424 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4L7P0CJ90 424 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms