RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 ARCN1P48444 511 aaKnown RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 FAM182AQ5T1J6 154 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 NCEH1Q6PIU2 408 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 CAPN12Q6ZSI9 719 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 ZNF354CQ86Y25 554 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 PPM1NQ8N819 430 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 GABPB2Q8TAK5 448 aaPredicted RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 SRPK1Q96SB4 655 aaKnown RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 NKX2-4Q9H2Z4 354 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 UBP1Q9NZI7 540 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 LMCD1Q9NZU5 365 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 LHX3Q9UBR4 397 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 TBK1Q9UHD2 729 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 F5H423 210 aaPredicted RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 PMPCBO75439 489 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 MT-ND3P03897 115 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 CA4P22748 312 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 GP5P40197 560 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 CSKP41240 450 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 CSRP3P50461 194 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 AP1S1P61966 158 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 SULT2A1Q06520 285 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 SIRPB2Q5JXA9 342 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 PPP2R2DQ66LE6 453 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 PACS1Q6VY07 963 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 KIAA0408Q6ZU52 694 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 GRASPQ7Z6J2 395 aaPredicted RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 SRRM1Q8IYB3 904 aaKnown RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 IRF7Q92985 503 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 CEP44Q9C0F1 390 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 CHRAC1Q9NRG0 131 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
PDPN-202ENST00000376057 GDE1Q9NZC3 331 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 VPS51Q9UID3 782 aa11.24□□□□□ -0.61
PDPN-202ENST00000376057 MYLKQ15746 1914 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 GJA1P17302 382 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 MZF1P28698 734 aaPredicted RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 PBX2P40425 430 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 CRADDP78560 199 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 GUCY1A3Q02108 690 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 OLIG2Q13516 323 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 DBN1Q16643 649 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 LCA5Q86VQ0 697 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 E2F7Q96AV8 911 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 ZNF669Q96BR6 464 aaPredicted RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 SPHK2Q9NRA0 654 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 NKIRAS1Q9NYS0 192 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 CCL26Q9Y258 94 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 HS3ST2Q9Y278 367 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 HMX2A2RU54 273 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 CBX4O00257 560 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 RFPL1O75677 317 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 TMCC1O94876 653 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 NEK3P51956 506 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 ITKQ08881 620 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 LMAN2Q12907 356 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 MTM1Q13496 603 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 UGP2Q16851 508 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 TSTD2Q5T7W7 516 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 GPR149Q86SP6 731 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 KCNMB4Q86W47 210 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 EFHBQ8N7U6 833 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 SMG7Q92540 1137 aaKnown RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 ZBTB9Q96C00 473 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 FAM167BQ9BTA0 163 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 TDRD1Q9BXT4 1180 aaKnown RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 NOD2Q9HC29 1040 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 ZFATQ9P243 1243 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 VPS28Q9UK41 221 aa11.23□□□□□ -0.61
PDPN-202ENST00000376057 MRPS23Q9Y3D9 190 aaKnown RBP11.23□□□□□ -0.61
PDPN-202ENST00000376057 A0A1W2PPM1 405 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SLC7A4O43246 635 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 FZD6O60353 706 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 ASMTLO95671 621 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CEBPBP17676 345 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 GLDCP23378 1020 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 NMBRP28336 390 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 MAXP61244 160 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 MPP2Q14168 576 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 INSCQ1MX18 579 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 RASSF3Q86WH2 238 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CTAGE3PQ8IX95 158 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 WFDC5Q8TCV5 224 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CALML6Q8TD86 181 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 IFT43Q96FT9 208 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 APOPT1Q96IL0 206 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms