RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SELENBP1Q13228 472 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 LRTOMTQ8WZ04 291 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 HPDLQ96IR7 371 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 CNDP2Q96KP4 475 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 CIB1Q99828 191 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 WDR41Q9HAD4 459 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 HMG20AQ9NP66 347 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 FAM49BQ9NUQ9 324 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 DPP3Q9NY33 737 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 CDY1Q9Y6F8 540 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 PSMD11O00231 422 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 INHAP05111 366 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 KCNA4P22459 653 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 PRKCHP24723 683 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 CD52P31358 61 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 RFC1P35251 1148 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 TMBIM6P55061 237 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ABCE1P61221 599 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 PPP6R3Q5H9R7 873 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 KIAA2013Q8IYS2 634 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ADGRF2Q8IZF7 708 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 UBA3Q8TBC4 463 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 HASPINQ8TF76 798 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 TFAP2CQ92754 450 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 TUBA1CQ9BQE3 449 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 KATNAL1Q9BW62 490 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 NAA50Q9GZZ1 169 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 SMIM35A0A1B0GVV1 85 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 GOLGA8CPA6NN73 597 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF195O14628 629 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ACOT8O14734 319 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 AKAP10O43572 662 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 GLRA3O75311 464 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 GUCY1B2O75343 617 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 PROZP22891 400 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 RPL10P27635 214 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 DPYSL3Q14195 570 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 NHSL2Q5HYW2 709 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 NOTUMQ6P988 496 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 SIX5Q8N196 739 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ZSCAN18Q8TBC5 510 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 TWNKQ96RR1 684 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 SORT1Q99523 831 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 WDR12Q9GZL7 423 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 TJP2Q9UDY2 1190 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 ST3GAL5Q9UNP4 418 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 TIMM13Q9Y5L4 95 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-203ENST00000375315 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
C9orf3-203ENST00000375315 RGS13O14921 159 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 ASS1P00966 412 aaKnown RBP12.27□□□□□ -0.44
C9orf3-203ENST00000375315 TCF4P15884 667 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 NR4A1P22736 598 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 HPCAL1P37235 193 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 MTX3Q5HYI7 312 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 N4BP2L1Q5TBK1 243 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-203ENST00000375315 SLC27A1Q6PCB7 646 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 BPHLQ86WA6 291 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-203ENST00000375315 COLGALT2Q8IYK4 626 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 CPSF7Q8N684 471 aaKnown RBP12.27□□□□□ -0.44
C9orf3-203ENST00000375315 RCN3Q96D15 328 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 HEXIM2Q96MH2 286 aaKnown RBP12.27□□□□□ -0.44
C9orf3-203ENST00000375315 NIF3L1Q9GZT8 377 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 COG4Q9H9E3 785 aa12.27□□□□□ -0.44
C9orf3-203ENST00000375315 SAE1Q9UBE0 346 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-203ENST00000375315 TRIM38O00635 465 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.45
C9orf3-203ENST00000375315 TCN1P20061 433 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-203ENST00000375315 MYF6P23409 242 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 NME5P56597 212 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 FAM117BQ6P1L5 589 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 EPGNQ6UW88 154 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 USP43Q70EL4 1123 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 HEATR4Q86WZ0 1026 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 ARRDC4Q8NCT1 418 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 ZNF606Q8WXB4 792 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 TFAP2BQ92481 460 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 NACC2Q96BF6 587 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 ACSF2Q96CM8 615 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-203ENST00000375315 SDCBP2Q9H190 292 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 RMND5AQ9H871 391 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 TRAF6Q9Y4K3 522 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 COL1A2P08123 1366 aa12.27□□□□□ -0.45
C9orf3-203ENST00000375315 ILVBLA1L0T0 632 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TRIM64A6NGJ6 449 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 MSI1O43347 362 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 SEC24DO94855 1032 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 C1QAP02745 245 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 GCNT1Q02742 428 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 PPP4R4Q6NUP7 873 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 KCTD8Q6ZWB6 473 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 ANKRD13BQ86YJ7 626 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 UNC45BQ8IWX7 931 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms