RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PCDH20Q8N6Y1 951 aaKnown RBP17.24■□□□□ 0.35
RXRB-201ENST00000374680 TXNDC5Q8NBS9 432 aaKnown RBP17.24■□□□□ 0.35
RXRB-201ENST00000374680 PSMG2Q969U7 264 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 HMCESQ96FZ2 354 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 VAT1Q99536 393 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 ARHGEF38Q9NXL2 777 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 HCSTQ9UBK5 93 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 MATN3O15232 486 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 CCNCP24863 283 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 RPL9P32969 192 aaKnown RBP17.24■□□□□ 0.35
RXRB-201ENST00000374680 AIF1P55008 147 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 AQP4P55087 323 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 MRPS35P82673 323 aaKnown RBP17.24■□□□□ 0.35
RXRB-201ENST00000374680 IHHQ14623 411 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 PIK3R6Q5UE93 754 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 NAIF1Q69YI7 327 aaPredicted RBP17.24■□□□□ 0.35
RXRB-201ENST00000374680 ZYG11AQ6WRX3 759 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 PIM3Q86V86 326 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 CFAP52Q8N1V2 620 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 GDPD5Q8WTR4 605 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 OLFM1Q99784 485 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 ABCC13Q9NSE7 274 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 ANKRD12Q6UB98 2062 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 NT5C1B-RDH14C9J2C7 533 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 ANXA9O76027 345 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 CCDC166P0CW27 439 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 THEMIS2Q5TEJ8 643 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 RAP1GAP2Q684P5 730 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 SERINC5Q86VE9 423 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 OR6Y1Q8NGX8 325 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 C1orf21Q9H246 121 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 CATSPERBQ9H7T0 1116 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 NEU3Q9UQ49 428 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 RAP2CQ9Y3L5 183 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 TCAF1Q9Y4C2 921 aa17.24■□□□□ 0.35
RXRB-201ENST00000374680 C9JVG2 144 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
RXRB-201ENST00000374680 ARCN1P48444 511 aaKnown RBP17.23■□□□□ 0.35
RXRB-201ENST00000374680 ARSDP51689 593 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 CDH13P55290 713 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 TUSC3Q13454 348 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 TSTD2Q5T7W7 516 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 DSELQ8IZU8 1212 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 FBXW8Q8N3Y1 598 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 GCNAQ96QF7 691 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 CYP2S1Q96SQ9 504 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 DRC3Q9H069 523 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 GMIPQ9P107 970 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 A0A0U1RQF3 1178 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 PRSS56P0CW18 603 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 XRCC1P18887 633 aaPredicted RBP17.23■□□□□ 0.35
RXRB-201ENST00000374680 SOX11P35716 441 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 CD151P48509 253 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 THOP1P52888 689 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 GK5Q6ZS86 529 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 TRIM67Q6ZTA4 783 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 ACAD11Q709F0 780 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 DHDDSQ86SQ9 333 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 SMIM14Q96QK8 99 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 FCRL5Q96RD9 977 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 OSBPL2Q9H1P3 480 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 RRN3Q9NYV6 651 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 SORCS3Q9UPU3 1222 aa17.23■□□□□ 0.35
RXRB-201ENST00000374680 RNASEH1O60930 286 aaKnown RBP17.22■□□□□ 0.35
RXRB-201ENST00000374680 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
RXRB-201ENST00000374680 ART3Q13508 389 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 CLEC6AQ6EIG7 209 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 IRGCQ6NXR0 463 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 EP400NLQ6ZTU2 488 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 OR52K2Q8NGK3 314 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 BLOC1S5Q8TDH9 187 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 ACTRT2Q8TDY3 377 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 ANKRD49Q8WVL7 239 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 DPF3Q92784 378 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 PRDM16Q9HAZ2 1276 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 CDYLQ9Y232 598 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
RXRB-201ENST00000374680 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 CABYRO75952 493 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 GEMP55040 296 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 POLE2P56282 527 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 CYLC2Q14093 348 aaPredicted RBP17.22■□□□□ 0.35
RXRB-201ENST00000374680 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 STYXQ8WUJ0 223 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 NOL6Q9H6R4 1146 aaKnown RBP17.22■□□□□ 0.35
RXRB-201ENST00000374680 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 ADA2Q9NZK5 511 aa17.22■□□□□ 0.35
RXRB-201ENST00000374680 A0A0U1RQS6 177 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 CAPN8A6NHC0 703 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 CPB1P15086 417 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 MYEOVQ96EZ4 313 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 SLC45A3Q96JT2 553 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 IL12RB2Q99665 862 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 SIKE1Q9BRV8 207 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 VCXQ9H320 206 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms