RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PLIN3O60664 434 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 MGAT1P26572 445 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 SNRPFP62306 86 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 DGKKQ5KSL6 1271 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 LRRC38Q5VT99 294 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 CPNE8Q86YQ8 564 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ZNF781Q8N8C0 355 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 MCOLN3Q8TDD5 553 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ULK4Q96C45 1275 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 CAB39LQ9H9S4 337 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 TOPORSQ9NS56 1045 aaPredicted RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 TMLHEQ9NVH6 421 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 B3GNT3Q9Y2A9 372 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 CLUHO75153 1309 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 HAT1O14929 419 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 SYNCRIPO60506 623 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 S100A6P06703 90 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 MAMLD1Q13495 774 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 CSHL1Q14406 222 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 PDK2Q15119 407 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 DLG2Q15700 870 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ZSWIM7Q19AV6 140 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 CYP20A1Q6UW02 462 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 STX12Q86Y82 276 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 GRAMD2AQ8IUY3 354 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 NAT16Q8N8M0 369 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 Q8N9G6 341 aaPredicted RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 TFB1MQ8WVM0 346 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 FBXL20Q96IG2 436 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 SLC7A5P2Q9GIP4 190 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 MIR1-1HGQ9H1L0 117 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 KRT84Q9NSB2 600 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 CATSPERZQ9NTU4 200 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 DNAJC11Q9NVH1 559 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 PFDN2Q9UHV9 154 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 TMEM94Q12767 1356 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 EFCAB9A8MZ26 197 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 RGS10O43665 173 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 HUS1O60921 280 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 RNASEH2AO75792 299 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 ERVK-10P10266 1014 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ZNF543Q08ER8 600 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 COX10Q12887 443 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 PMS2P3Q13401 168 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 C1DQ13901 141 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 SEMA3AQ14563 771 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 TRIM71Q2Q1W2 868 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 SCML4Q8N228 414 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 MPP5Q8N3R9 675 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 METTL25Q8N6Q8 603 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 PPHLN1Q8NEY8 458 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 SHC3Q92529 594 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 EBNA1BP2Q99848 306 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 TUBA1CQ9BQE3 449 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 C17orf75Q9HAS0 396 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 SNCAIPQ9Y6H5 919 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 TSPAN1O60635 241 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 ADAM23O75077 832 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 ATE1O95260 518 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CALCAP01258 141 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 IL6P05231 212 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PRKAR1AP10644 381 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PGAM1P18669 254 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CDK18Q07002 472 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 NCF4Q15080 339 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 RFX4Q33E94 735 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 FAM122CQ6P4D5 195 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 FAM131AQ6UXB0 335 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CATSPER4Q7RTX7 472 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 ELMOD1Q8N336 334 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 LSM14AQ8ND56 463 aaKnown RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 DCAKDQ8WVC6 231 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 SNX19Q92543 992 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 SENP6Q9GZR1 1112 aaPredicted RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 GINS2Q9Y248 185 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 EML1O00423 815 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 FAM189A1O60320 539 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 RSL1D1O76021 490 aaKnown RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 CST1P01037 141 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 MYCP01106 439 aaPredicted RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 GPIP06744 558 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 TFEBP19484 476 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 SLC12A3P55017 1021 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 TPRG1LQ5T0D9 272 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CMC1Q7Z7K0 106 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 LARGE2Q8N3Y3 721 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CCDC185Q8N715 623 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 C19orf60Q96EN9 201 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 GFM1Q96RP9 751 aaKnown RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 GAD1Q99259 594 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CTRCQ99895 268 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 FEM1AQ9BSK4 669 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 COPS4Q9BT78 406 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 MED10Q9BTT4 135 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 INIPQ9NRY2 104 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 MRPS7Q9Y2R9 242 aaKnown RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 SNX9Q9Y5X1 595 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms