RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 CDK16Q00536 496 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 OTUD4Q01804 1114 aaKnown RBP5.5□□□□□ -1.53
LINC00474-201ENST00000374014 CDK18Q07002 472 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ARHGAP1Q07960 439 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 HNRNPA0Q13151 305 aaKnown RBP5.5□□□□□ -1.53
LINC00474-201ENST00000374014 GRM7Q14831 915 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 SNCBQ16143 134 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 PDK4Q16654 411 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 GALNTL6Q49A17 601 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 PTPN20Q4JDL3 420 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 CCDC38Q502W7 563 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ZBTB41Q5SVQ8 909 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 NUGGCQ68CJ6 796 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ARHGAP17Q68EM7 881 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 IQSEC1Q6DN90 963 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ZNF449Q6P9G9 518 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 DPH6Q7L8W6 267 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ADGRE4PQ86SQ3 457 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 TMEM110Q86TL2 294 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 SESTD1Q86VW0 696 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 TMPRSS6Q8IU80 811 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ULK2Q8IYT8 1036 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 LRRC34Q8IZ02 419 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 GPR135Q8IZ08 494 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 NAT8LQ8N9F0 302 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 GPRC5AQ8NFJ5 357 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 RAB3IL1Q8TBN0 382 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 MDM1Q8TC05 714 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ACTL9Q8TC94 416 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 DENND1AQ8TEH3 1009 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 PYROXD1Q8WU10 500 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 TFAP2BQ92481 460 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 MTBPQ96DY7 904 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 HPDLQ96IR7 371 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 NLRP4Q96MN2 994 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 TGS1Q96RS0 853 aaKnown RBP5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ZNF670Q9BS34 389 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 HERPUD2Q9BSE4 406 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 DDX23Q9BUQ8 820 aaKnown RBP5.5□□□□□ -1.53
LINC00474-201ENST00000374014 PITPNM3Q9BZ71 974 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 GCOM2Q9BZD3 368 aaPredicted RBP5.5□□□□□ -1.53
LINC00474-201ENST00000374014 TRABDQ9H4I3 376 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 IPPKQ9H8X2 491 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 SAYSD1Q9NPB0 183 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 KCNK9Q9NPC2 374 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 SLC2A4RGQ9NR83 387 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 TXLNGQ9NUQ3 528 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 PARPBPQ9NWS1 579 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 MORF4L1Q9UBU8 362 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 CHORDC1Q9UHD1 332 aaPredicted RBP5.5□□□□□ -1.53
LINC00474-201ENST00000374014 SIX4Q9UIU6 781 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 ZNF180Q9UJW8 692 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 USP18Q9UMW8 372 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 IKBKGQ9Y6K9 419 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 USH1CQ9Y6N9 552 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 LCTP09848 1927 aa5.5□□□□□ -1.53
LINC00474-201ENST00000374014 DOCK5Q9H7D0 1870 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 SMIM35A0A1B0GVV1 85 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 SMIM23A6NLE4 172 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 C2CD4BA6NLJ0 364 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 FAM90A27PA6NNH2 459 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 HACD1B0YJ81 288 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 TCP11X1B4DZS4 312 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 DNM1LO00429 736 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 KLF11O14901 512 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 TYROBPO43914 113 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 RAMP2O60895 175 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 ARIH2O95376 493 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 TGDSO95455 350 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 LGALS2P05162 132 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 KRT19P08727 400 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 RBP3P10745 1247 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 CETPP11597 493 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 HARSP12081 509 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 KRT10P13645 584 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 ALADP13716 330 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 CCNB1P14635 433 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 PTPN1P18031 435 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 CYP3A5P20815 502 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 SDC4P31431 198 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 MSH2P43246 934 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 RPL34P49207 117 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 CTCFP49711 727 aaPredicted RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 SLC8A3P57103 927 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 EIF3EP60228 445 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 FSTL1Q12841 308 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 BNIP1Q12981 228 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 PDIA2Q13087 525 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 DNAJC3Q13217 504 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 MOGSQ13724 837 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 EIF4HQ15056 248 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 PCOLCEQ15113 449 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 NOMO1Q15155 1222 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 SEPT7Q16181 437 aaKnown RBP5.49□□□□□ -1.53
LINC00474-201ENST00000374014 DGKDQ16760 1214 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 PARP6Q2NL67 630 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 DUSP28Q4G0W2 176 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 SLC45A4Q5BKX6 768 aa5.49□□□□□ -1.53
LINC00474-201ENST00000374014 STXBP5Q5T5C0 1151 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms