RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 HNRNPCL2B2RXH8 293 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 PARNO95453 639 aaKnown RBP17.57■□□□□ 0.4
PTPRU-202ENST00000373779 MBTD1Q05BQ5 628 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 ARL13AQ5H913 290 aaPredicted RBP17.57■□□□□ 0.4
PTPRU-202ENST00000373779 ANO7Q6IWH7 933 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 ZFYVE28Q9HCC9 887 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 CHRAC1Q9NRG0 131 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 DNAJB4Q9UDY4 337 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 VPS28Q9UK41 221 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SEC22BO75396 215 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 ITGB6P18564 788 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 MZF1P28698 734 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-202ENST00000373779 MSS51Q4VC12 460 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 MTX3Q5HYI7 312 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF567Q8N184 647 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 CMASQ8NFW8 434 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-202ENST00000373779 BTRCQ9Y297 605 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 TPRKBQ9Y3C4 175 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 NRP2O60462 931 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 MPP2Q14168 576 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 CLYBLQ8N0X4 340 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 DGCR6LQ9BY27 220 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 ZMYM5Q9UJ78 669 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 TRAF6Q9Y4K3 522 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
PTPRU-202ENST00000373779 IRF6O14896 467 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 EPS8Q12929 822 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 BFSP2Q13515 415 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 GJC2Q5T442 439 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-202ENST00000373779 LRRC49Q8IUZ0 686 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 UBR7Q8N806 425 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 CNTD1Q8N815 330 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 ACTRT2Q8TDY3 377 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 FAXDC2Q96IV6 333 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 ALDH1A1P00352 501 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 NRLP54845 237 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 OGDHQ02218 1023 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 TREML2Q5T2D2 321 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 BROXQ5VW32 411 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 FSTL4Q6MZW2 842 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 GANCQ8TET4 914 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 TXLNGYQ9BZA5 131 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 GBA3Q9H227 469 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 NOL11Q9H8H0 719 aaKnown RBP17.56■□□□□ 0.4
PTPRU-202ENST00000373779 PRKAG3Q9UGI9 489 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 SPTLC1O15269 473 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 PSEN1P49768 467 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 IL2P60568 153 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 PYROXD2Q8N2H3 581 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 FAM47BQ8NA70 645 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 APOL4Q9BPW4 351 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 MTFR1LQ9H019 292 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 NXF3Q9H4D5 531 aaKnown RBP17.56■□□□□ 0.4
PTPRU-202ENST00000373779 ATP13A1Q9HD20 1204 aa17.56■□□□□ 0.4
PTPRU-202ENST00000373779 LAMA4Q16363 1823 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 AZIN1O14977 448 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 RGS14O43566 566 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 BUD23O43709 281 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 KCNH1O95259 989 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 GAD2Q05329 585 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 GRM3Q14832 879 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 PSMD5Q16401 504 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 CA9Q16790 459 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 LSM12Q3MHD2 195 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SLC39A12Q504Y0 691 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 OTULINQ96BN8 352 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 TRMOQ9BU70 441 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 MAF1Q9H063 256 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 EIF2B3Q9NR50 452 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 KLF11O14901 512 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 HOXC6P09630 235 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SMIM10L2AP0DMW4 78 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SMIM10L2BP0DMW5 78 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF7P17097 686 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF157P51786 506 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 MTA1Q13330 715 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SEMA5AQ13591 1074 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 KCNJ11Q14654 390 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 FAM35AQ86V20 835 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 NKAPQ8N5F7 415 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 FBXO30Q8TB52 745 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 MYLPFQ96A32 169 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 RIBC2Q9H4K1 309 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 STK39Q9UEW8 545 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 PTCH2Q9Y6C5 1203 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF541Q9H0D2 1346 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 BBIP1A8MTZ0 92 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 TIPRLO75663 272 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 METTL18O95568 372 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 CCDC159P0C7I6 412 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 YWHAQP27348 245 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SLC25A11Q02978 314 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 MRPL28Q13084 256 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 DGUOKQ16854 277 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 ZIK1Q3SY52 487 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 OR52K2Q8NGK3 314 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF483Q8TF39 744 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms