RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 CFHP08603 1231 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 HOXC6P09630 235 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 PTPN5P54829 565 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 EEF1A1P68104 462 aaKnown RBP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 EEF1A2Q05639 463 aaKnown RBP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 TFDP1Q14186 410 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 EFTUD2Q15029 972 aaKnown RBP eCLIP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 MAPKAPK3Q16644 382 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 UGP2Q16851 508 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 WDR72Q3MJ13 1102 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 PPP1R26Q5T8A7 1209 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 EEF1A1P5Q5VTE0 462 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 TPGS2Q68CL5 300 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 MFSD7Q6UXD7 560 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 C4orf50Q6ZRC1 276 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 CDR2LQ86X02 465 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 WDTC1Q8N5D0 677 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 LHFPL5Q8TAF8 219 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 TTC8Q8TAM2 541 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 MAP6Q96JE9 813 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 ZNF717Q9BY31 904 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 DDX43Q9NXZ2 648 aaKnown RBP8.33□□□□□ -1.08
GARNL3-201ENST00000373386 ZNF175Q9Y473 711 aa8.33□□□□□ -1.08
GARNL3-201ENST00000373386 A0A1W2PPM1 405 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 UBXN8O00124 270 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ACKR2O00590 384 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 SLC22A1O15245 554 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 USP2O75604 605 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 RSL1D1O76021 490 aaKnown RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 USP1O94782 785 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 FUCA1P04066 466 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 EDN1P05305 212 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 CKBP12277 381 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 MYL4P12829 197 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ACSL1P33121 698 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 MAGEA11P43364 429 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ATP6V0D1P61421 351 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 RPL7AP62424 266 aaKnown RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 BEX3Q00994 111 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TRPC3Q13507 836 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 FRG1Q14331 258 aaKnown RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 HIF1AQ16665 826 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 C2CD6Q53TS8 623 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ADGRD1Q6QNK2 874 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 MTDHQ86UE4 582 aaKnown RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TAB3Q8N5C8 712 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 GLIS1Q8NBF1 620 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 IL17RDQ8NFM7 739 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 CMASQ8NFW8 434 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 GANCQ8TET4 914 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TRIM63Q969Q1 353 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ELMO3Q96BJ8 720 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ZBTB45Q96K62 511 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TMEM68Q96MH6 324 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TRIM55Q9BYV6 548 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 OTOFQ9HC10 1997 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 NUP50Q9UKX7 468 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 CCDC78A2IDD5 438 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 GATCO43716 136 aaKnown RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ENTPD5O75356 428 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 CCNDBP1O95273 360 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 SLC25A27O95847 323 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TNNC2P02585 160 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ZSCAN5DPP0CG00 497 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ARL4CP56559 192 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 KCNC4Q03721 635 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ZBTB16Q05516 673 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 NCF4Q15080 339 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TBRG1Q3YBR2 411 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 KRBOX4Q5JUW0 171 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 C6orf163Q5TEZ5 329 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 PXDC1Q5TGL8 231 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 DCUN1D2Q6PH85 259 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 KRT74Q7RTS7 529 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 DCP2Q8IU60 420 aaKnown RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 KIAA2013Q8IYS2 634 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 SLC4A11Q8NBS3 891 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 PIK3C3Q8NEB9 887 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ST13P5Q8NFI4 369 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 OR8K3Q8NH51 312 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 MCRS1Q96EZ8 462 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 MCEEQ96PE7 176 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 C19orf43Q9BQ61 176 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 BTBD10Q9BSF8 475 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ACSS3Q9H6R3 686 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 USP29Q9HBJ7 922 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 PNPLA8Q9NP80 782 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 TNFSF13BQ9Y275 285 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 RALGAPA2Q2PPJ7 1873 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 CLUHO75153 1309 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 APOC4-APOC2K7ER74 178 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 ADCY6O43306 1168 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 CST3P01034 146 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-201ENST00000373386 APOC2P02655 101 aa8.32□□□□□ -1.08
GARNL3-201ENST00000373386 PRKCBP05771 671 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms