RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LGALS3BPQ08380 585 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 NT5DC1Q5TFE4 455 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ZNF248Q8NDW4 579 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 CERS2Q96G23 380 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 PDCD10Q9BUL8 212 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 TLR10Q9BXR5 811 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 PDGFDQ9GZP0 370 aaPredicted RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 CHST7Q9NS84 486 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 GPSM3Q9Y4H4 160 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 A0A0B4J269 797 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 CCDC182A6NF36 153 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 TRIM38O00635 465 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 NTRK1P04629 796 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 LGALS2P05162 132 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 CYP3A4P08684 503 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 BMP7P18075 431 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 MAPK10P53779 464 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 RAP1GAP2Q684P5 730 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 C16orf46Q6P387 395 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 FBXW8Q8N3Y1 598 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 CCDC185Q8N715 623 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 BPIFB6Q8NFQ5 453 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 FBXO6Q9NRD1 293 aaPredicted RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 PHF11Q9UIL8 331 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
VCL-202ENST00000372755 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 F8VP50 259 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 SNAP91O60641 907 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 OTCP00480 354 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 FAM153BP0C7A2 387 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 COX4I1P13073 169 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 VEGFAP15692 232 aaPredicted RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 CES1P23141 567 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 NTRK3Q16288 839 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 LSM12Q3MHD2 195 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 FAM153CQ494X1 144 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 MARK2Q7KZI7 788 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 DET1Q7L5Y6 550 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 MRPL57Q9BQC6 102 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 PORCNQ9H237 461 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 TOR4AQ9NXH8 423 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 DCTN2Q13561 401 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 ANXA8L1Q5VT79 327 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ARCQ7LC44 396 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ACMSDQ8TDX5 336 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 PHF10Q8WUB8 498 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 PYDC1Q8WXC3 89 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 AP3S1Q92572 193 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 MBOAT7Q96N66 472 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 GRIP2Q9C0E4 1043 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ASAH2Q9NR71 780 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 CCNYL3P0C7X3 344 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 FGFR3P22607 806 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 PSME3P61289 254 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 FAM171BQ6P995 826 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ADGRG2Q8IZP9 1017 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 HJURPQ8NCD3 748 aaPredicted RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 FNDC11Q9BVV2 318 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 MTFR1LQ9H019 292 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 SYNPO2Q9UMS6 1093 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 AP3D1O14617 1153 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 SSNA1O43805 119 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 PEX11AO75192 247 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 SERPINB7O75635 380 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 CYP1A2P05177 515 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 MYBL2P10244 700 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 HOXB6P17509 224 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 GRIA3P42263 894 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 QPRTQ15274 297 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ADAMTSL2Q86TH1 951 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 HIPK1Q86Z02 1210 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 EPB41L1Q9H4G0 881 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 TMEM138Q9NPI0 162 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ANKRD63C9JTQ0 380 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ABHD2P08910 425 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 HTR1BP28222 390 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 OMPP47874 163 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ITGADQ13349 1161 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 NRF1Q16656 503 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ZC3H12AQ5D1E8 599 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 XKR6Q5GH73 641 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 GPRIN3Q6ZVF9 776 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 GAD1Q99259 594 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ZNHIT2Q9UHR6 403 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 GTPBP1O00178 669 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 ERBB2P04626 1255 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 CCNB1P14635 433 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ATP4AP20648 1035 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 PPIBP23284 216 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 ABL2P42684 1182 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 RAB10P61026 200 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms