RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GSTCDQ8NEC7 633 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 GABBR2O75899 941 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 BBOX1O75936 387 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 GSTT2BP0CG30 244 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 CD83Q01151 205 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 ZZZ3Q8IYH5 903 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 SLITRK1Q96PX8 696 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 METTL8Q9H825 291 aaKnown RBP15.39■□□□□ 0.05
COL5A1-201ENST00000371817 TBX3O15119 743 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 FSHRP23945 695 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 AP2S1P53680 142 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-201ENST00000371817 PITPNAQ00169 270 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 ELP6Q0PNE2 266 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 ETNPPLQ8TBG4 499 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 CRELD1Q96HD1 420 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 ANGPT4Q9Y264 503 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A9O60656 530 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 IDO1P14902 403 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A6P19224 532 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A1P22309 533 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A4P22310 534 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A3P35503 534 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 CYP20A1Q6UW02 462 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 NT5DC3Q86UY8 548 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 ENGASEQ8NFI3 743 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 BTBD9Q96Q07 612 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A7Q9HAW7 530 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A10Q9HAW8 530 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 UGT1A8Q9HAW9 530 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 NFKB1P19838 968 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 USP43Q70EL4 1123 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 OAFQ86UD1 273 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 SYT12Q8IV01 421 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 YAF2Q8IY57 180 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 AGPAT3Q9NRZ7 376 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 PROSCO94903 275 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CYP2F1P24903 491 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 C10orf120Q5SQS8 335 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 MAP10Q9P2G4 905 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TNPO3Q9Y5L0 923 aaKnown RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TIPRLO75663 272 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 SHBGP04278 402 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 IRF1P10914 325 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 AMPD2Q01433 879 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TMEM143Q96AN5 459 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TAF6LQ9Y6J9 622 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 PZPP20742 1482 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 LDOC1O95751 146 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 OGFOD2Q6N063 350 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 THAP5Q7Z6K1 395 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 KCNN2Q9H2S1 579 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ISPDA4D126 451 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 C2orf71A6NGG8 1288 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 PHACTR4Q8IZ21 702 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF567Q8N184 647 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 MREGQ8N565 214 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ACOT12Q8WYK0 555 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TOP1MTQ969P6 601 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CCDC3Q9BQI4 270 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 MUC13Q9H3R2 512 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 AZGP1P25311 298 aaKnown RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF177Q13360 481 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 PFKFB4Q16877 469 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 GALNTL5Q7Z4T8 443 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ALYREFQ86V81 257 aaKnown RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF548Q8NEK5 533 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TEFMQ96QE5 360 aaKnown RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 AIF1LQ9BQI0 150 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 OPTCQ9UBM4 332 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 PRKAB1Q9Y478 270 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 EME2A4GXA9 379 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CTSKP43235 329 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CACNB3P54284 484 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ADAM8P78325 824 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CBWD3Q5JTY5 395 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CBWD5Q5RIA9 395 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF470Q6ECI4 717 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 DRAXINQ8NBI3 349 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CIB1Q99828 191 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TREM1Q9NP99 234 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 SMPD3Q9NY59 655 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-201ENST00000371817 LEMD2Q8NC56 503 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 SLC5A5Q92911 643 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 TNKS2Q9H2K2 1166 aa15.38■□□□□ 0.05
COL5A1-201ENST00000371817 CPSF1Q10570 1443 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 PPEF2O14830 753 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ZC3H11AO75152 810 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 MGAT1P26572 445 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 GRIA4P48058 902 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 SLITRK4Q8IW52 837 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ZC3H7AQ8IWR0 971 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 MBOAT7Q96N66 472 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 RPRD1AQ96P16 312 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 NODALQ96S42 347 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms