RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GALNTL6Q49A17 601 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 FNDC3BQ53EP0 1204 aaKnown RBP15.23■□□□□ 0.03
LMO4-201ENST00000370542 DUPD1Q68J44 220 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 CAPRIN2Q6IMN6 1127 aaKnown RBP15.23■□□□□ 0.03
LMO4-201ENST00000370542 GLRX5Q86SX6 157 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 TAC4Q86UU9 113 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 ORAI3Q9BRQ5 295 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 RSPH9Q9H1X1 276 aaPredicted RBP15.23■□□□□ 0.03
LMO4-201ENST00000370542 POPDC2Q9HBU9 364 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 SCML1Q9UN30 329 aa15.23■□□□□ 0.03
LMO4-201ENST00000370542 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.23■□□□□ 0.03
LMO4-201ENST00000370542 SPAARA0A1B0GVQ0 90 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 MEI4A8MW99 385 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 TMEM253P0C7T8 217 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 PAX7P23759 505 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 GCKP35557 465 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 HADHBP55084 474 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 RPS24P62847 133 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 YWHAZP63104 245 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 SIM1P81133 766 aaPredicted RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 DR1Q01658 176 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 TCEAL1Q15170 157 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 RBBP5Q15291 538 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 HNRNPA1L2Q32P51 320 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 FSCBQ5H9T9 825 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 AP1ARQ63HQ0 302 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 IL27RAQ6UWB1 636 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 USP30Q70CQ3 517 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 TRMT10CQ7L0Y3 403 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 BZW1Q7L1Q6 419 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 IRF2BP2Q7Z5L9 587 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 RAB44Q7Z6P3 723 aaPredicted RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 NT5DC3Q86UY8 548 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 MFN1Q8IWA4 741 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 ZCCHC9Q8N567 271 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 WDTC1Q8N5D0 677 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 ZNF366Q8N895 744 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 SHC3Q92529 594 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 DDX47Q9H0S4 455 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 C6orf106Q9H6K1 298 aaPredicted RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 ACP6Q9NPH0 428 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 ASNSD1Q9NWL6 643 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 EIF2B4Q9UI10 523 aaKnown RBP15.22■□□□□ 0.03
LMO4-201ENST00000370542 PCDHGC3Q9UN70 934 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 ARL2BPQ9Y2Y0 163 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 PCDHGB2Q9Y5G2 931 aa15.22■□□□□ 0.03
LMO4-201ENST00000370542 KCNU1A8MYU2 1149 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 E5RJQ4 531 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 AHCYL1O43865 530 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 SH3BP5O60239 455 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 SNX3O60493 162 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 TRUB2O95900 331 aaKnown RBP15.21■□□□□ 0.03
LMO4-201ENST00000370542 VIMP08670 466 aaKnown RBP15.21■□□□□ 0.03
LMO4-201ENST00000370542 SLC9A1P19634 815 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 GNA15P30679 374 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 CSKP41240 450 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
LMO4-201ENST00000370542 COPS2P61201 443 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 SCAPQ12770 1279 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 ZNF423Q2M1K9 1284 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 DCAF6Q58WW2 860 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 TNFAIP8L3Q5GJ75 292 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 CEP128Q6ZU80 1094 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 LMNTD2Q8IXW0 634 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 BAHD1Q8TBE0 780 aaPredicted RBP15.21■□□□□ 0.03
LMO4-201ENST00000370542 RFFLQ8WZ73 363 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 FAM149B1Q96BN6 582 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 BTN2A3PQ96KV6 586 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 SLC2A13Q96QE2 648 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 BTBD1Q9H0C5 482 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 NEUROG2Q9H2A3 272 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 SGK2Q9HBY8 427 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 SCUBE2Q9NQ36 999 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 APEX2Q9UBZ4 518 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 AMACRQ9UHK6 382 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 XPO7Q9UIA9 1087 aaKnown RBP15.21■□□□□ 0.03
LMO4-201ENST00000370542 SLCO1B1Q9Y6L6 691 aa15.21■□□□□ 0.03
LMO4-201ENST00000370542 CFAP46Q8IYW2 2715 aa15.21■□□□□ 0.02
LMO4-201ENST00000370542 TTI1O43156 1089 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 SMNDC1O75940 238 aaKnown RBP eCLIP15.2■□□□□ 0.02
LMO4-201ENST00000370542 DKK1O94907 266 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 GJB6O95452 261 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 SEMA4FO95754 770 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 SRPRAP08240 638 aaKnown RBP15.2■□□□□ 0.02
LMO4-201ENST00000370542 KRT5P13647 590 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 STAT1P42224 750 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 AFF3P51826 1226 aaKnown RBP15.2■□□□□ 0.02
LMO4-201ENST00000370542 RWDD2BP57060 319 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 BNIP1Q12981 228 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 BLMHQ13867 455 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 TRIP6Q15654 476 aaKnown RBP15.2■□□□□ 0.02
LMO4-201ENST00000370542 EXOC3L4Q17RC7 722 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 PARP6Q2NL67 630 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 SPDYAQ5MJ70 313 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 C9orf64Q5T6V5 341 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 ZNF776Q68DI1 518 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms