RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 INSIG1O15503 277 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 ABCB7O75027 752 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 TJP3O95049 919 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 RETP07949 1114 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 PYGMP11217 842 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 CCNB1P14635 433 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 SERPINA4P29622 427 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 PTGER3P43115 390 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 SCNN1BP51168 640 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 MAXP61244 160 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 ZNF33AQ06730 810 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 ADCY2Q08462 1091 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 ITKQ08881 620 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 HNRNPDQ14103 355 aaKnown RBP15.02■□□□□ -0
COL9A1-204ENST00000370496 NUMA1Q14980 2115 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 RPS6KA1Q15418 735 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 ZNF805Q5CZA5 627 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 SYCP2LQ5T4T6 812 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 PIP5KL1Q5T9C9 394 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 AADACL2Q6P093 401 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 FBXL19Q6PCT2 694 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 NCEH1Q6PIU2 408 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 ERN2Q76MJ5 926 aaKnown RBP15.02■□□□□ -0
COL9A1-204ENST00000370496 PARS2Q7L3T8 475 aaKnown RBP15.02■□□□□ -0
COL9A1-204ENST00000370496 SRLQ86TD4 932 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 RGL4Q8IZJ4 473 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 OR2T34Q8NGX1 318 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 UBE2Q2Q8WVN8 375 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 MAML1Q92585 1016 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 RUBCNQ92622 972 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 FATE1Q969F0 183 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 KLHL32Q96NJ5 620 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 TUBGCP5Q96RT8 1024 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 MGME1Q9BQP7 344 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 POLR1EQ9GZS1 481 aaKnown RBP15.02■□□□□ -0
COL9A1-204ENST00000370496 BRD8Q9H0E9 1235 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 PCED1AQ9H1Q7 454 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 C6orf106Q9H6K1 298 aaPredicted RBP15.02■□□□□ -0
COL9A1-204ENST00000370496 SCUBE2Q9NQ36 999 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 SEPT10Q9P0V9 454 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 SAE1Q9UBE0 346 aaPredicted RBP15.02■□□□□ -0
COL9A1-204ENST00000370496 EFR3BQ9Y2G0 817 aa15.02■□□□□ -0
COL9A1-204ENST00000370496 GOLGA6L9A6NEM1 432 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 C16orf96A6NNT2 1141 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 APOC4-APOC2K7ER74 178 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 KCNK1O00180 336 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 RNF103O00237 685 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 PLRG1O43660 514 aaKnown RBP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 GJB3O75712 270 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 FSBPO95073 299 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 APOC2P02655 101 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 ADRB3P13945 408 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 MPLP40238 635 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 CSNK1DP48730 415 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 BCL2L1Q07817 233 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 NSUN2Q08J23 767 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 WDR45BQ5MNZ6 344 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 MEI1Q5TIA1 1274 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 DCAF12L1Q5VU92 463 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 ZC3H18Q86VM9 953 aaKnown RBP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 SLC41A1Q8IVJ1 513 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 CADM4Q8NFZ8 388 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 TFB1MQ8WVM0 346 aaKnown RBP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 HDAC8Q9BY41 377 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 CPEB1Q9BZB8 566 aaKnown RBP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 ARRDC1-AS1Q9H2J1 176 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 RBM22Q9NW64 420 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 TRMT1Q9NXH9 659 aaKnown RBP15.01□□□□□ -0.01
COL9A1-204ENST00000370496 PCDHGA5Q9Y5G8 931 aa15.01□□□□□ -0.01
COL9A1-204ENST00000370496 RALGAPA1Q6GYQ0 2036 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 HLA-DQB2P05538 268 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 XPAP23025 273 aaPredicted RBP15□□□□□ -0.01
COL9A1-204ENST00000370496 DPP6P42658 865 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 IFI35P80217 286 aaPredicted RBP15□□□□□ -0.01
COL9A1-204ENST00000370496 PRKD1Q15139 912 aaPredicted RBP15□□□□□ -0.01
COL9A1-204ENST00000370496 KIAA0895LQ68EN5 471 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 B4GALNT4Q76KP1 1039 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 REXO1L1PQ8IX06 675 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15□□□□□ -0.01
COL9A1-204ENST00000370496 TEX26Q8N6G2 289 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 PIGKQ92643 395 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 FAM131CQ96AQ9 280 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 ZNF419Q96HQ0 510 aaPredicted RBP15□□□□□ -0.01
COL9A1-204ENST00000370496 QKIQ96PU8 341 aaKnown RBP eCLIP15□□□□□ -0.01
COL9A1-204ENST00000370496 NUDCD1Q96RS6 583 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 HERPUD2Q9BSE4 406 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 AMACRQ9UHK6 382 aa15□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3DA0A087WVF3 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3IA0A087WXS9 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3EA0A087X179 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3KA0A087X1G2 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TTC24A2A3L6 582 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 BCLAF3A2AJT9 711 aaKnown RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3FA6NER0 549 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3LB9A6J9 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 H7C0C1 242 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 NEMP1O14524 444 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 KCNK3O14649 394 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms