RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 DPYSL3Q14195 570 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 MED22Q15528 200 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF655Q8N720 491 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SERPINB11Q96P15 392 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 RBM7Q9Y580 266 aaKnown RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 GPC6Q9Y625 555 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 LOC110117498-PIK3R3F6TDL0 507 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ZMPSTE24O75844 475 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 MLYCDO95822 493 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 GRIA4P48058 902 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 BRSK2Q8IWQ3 736 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 KIAA0895Q8NCT3 520 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 NELL1Q92832 810 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SLC47A1Q96FL8 570 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 PGLYRP2Q96PD5 576 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 OSMRQ99650 979 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 C1QTNF1Q9BXJ1 281 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 PCDH12Q9NPG4 1184 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 CLIC5Q9NZA1 410 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 PSME2Q9UL46 239 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 RGSL1A5PLK6 1076 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF613Q6PF04 617 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 TTC29Q8NA56 475 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 PIWIL2Q8TC59 973 aaKnown RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ZC3H10Q96K80 434 aaKnown RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 FOSL1P15407 271 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 UGT2B15P54855 530 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ACSM2AQ08AH3 577 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ACSM2BQ68CK6 577 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SULT1C3Q6IMI6 304 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 RHBGQ9H310 441 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 CAB39LQ9H9S4 337 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 GAKO14976 1311 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 FAM237BA0A1B0GVD1 139 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 PTPN5P54829 565 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 FAPQ12884 760 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 PPIL2Q13356 520 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 CYP2A13Q16696 494 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ARMC12Q5T9G4 340 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ETNPPLQ8TBG4 499 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SLC4A9Q96Q91 983 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ANGPT4Q9Y264 503 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 TIMM13Q9Y5L4 95 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ANPEPP15144 967 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 TLX1P31314 330 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SLC26A2P50443 739 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 STAG3L4Q8TBR4 150 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 RPH3AQ9Y2J0 694 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 RPLP2P05387 115 aaKnown RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 CYP4B1P13584 511 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ADRA1DP25100 572 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 TAS2R41P59536 307 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 SLC45A4Q5BKX6 768 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 FBXW8Q8N3Y1 598 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 LZTR1Q8N653 840 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 POLR1EQ9GZS1 481 aaKnown RBP12.56□□□□□ -0.4
HCFC1-202ENST00000369984 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
HCFC1-202ENST00000369984 OR10H2O60403 315 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF432O94892 652 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 OR5F1O95221 314 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CLIP3Q96DZ5 547 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 SYT15Q9BQS2 421 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 FDXACB1Q9BRP7 624 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 OSBPL11Q9BXB4 747 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 SORCS3Q9UPU3 1222 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 TRIM17Q9Y577 477 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 DCDC2CA8MYV0 355 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CBFA2T3O75081 653 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 SOX10P56693 466 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 MIIPQ5JXC2 388 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 BHLHB9Q6PI77 547 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 ADGRB3O60242 1522 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 GPR75-ASB3A0A0A6YYF3 556 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 NCK1P16333 377 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 BMP7P18075 431 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 PSMB4P28070 264 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CRADDP78560 199 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 FOLH1Q04609 750 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 RAPSNQ13702 412 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 C16orf59Q7L2K0 433 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 AGAP11Q8TF27 550 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CLK4Q9HAZ1 481 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 KANSL3Q9P2N6 904 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 MAPTP10636 758 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CLUP10909 449 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 MARSP56192 900 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CDKAL1Q5VV42 579 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms