RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DOCK1Q14185 1865 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 CDK5RAP2Q96SN8 1893 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 A0A1B0GVM2 712 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TMEM247A6NEH6 219 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TCAF2A6NFQ2 919 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 RAD51BO15315 384 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TBL1XO60907 577 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 PIGNO95427 931 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 EDN1P05305 212 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 CYP2A6P11509 494 aaPredicted RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 IL2P60568 153 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 NCALDP61601 193 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SOX4Q06945 474 aaPredicted RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC1A5Q15758 541 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SPDYAQ5MJ70 313 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 EMC10Q5UCC4 262 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 LIPMQ5VYY2 423 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 RHBDF2Q6PJF5 856 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 USP45Q70EL2 814 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 MRPL10Q7Z7H8 261 aaKnown RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 BANPQ8N9N5 519 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 FBXO22Q8NEZ5 403 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SCAMP5Q8TAC9 235 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 GPR152Q8TDT2 470 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 OLFM3Q96PB7 478 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC2A13Q96QE2 648 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 RBBP8Q99708 897 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 PTPN18Q99952 460 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 ELAC1Q9H777 363 aaKnown RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 ATP13A3Q9H7F0 1226 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SLCO1B3Q9NPD5 702 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC17A7Q9P2U7 560 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 APPL1Q9UKG1 709 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 CORO1CQ9ULV4 474 aaPredicted RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 EIF3LQ9Y262 564 aaKnown RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 RAP2CQ9Y3L5 183 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 A0A1W2PQ45 241 aaPredicted RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 A0A1W2PQY0 241 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC38A8A6NNN8 435 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SPTLC1O15269 473 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 PIAS1O75925 651 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 ASMTLO95671 621 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 NDST3O95803 873 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 C2P06681 752 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 HOXD8P13378 290 aaPredicted RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SERPINB5P36952 375 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 PIK3CGP48736 1102 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 NAGLUP54802 743 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 MAXP61244 160 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 ATP6V0D1P61421 351 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 FLOT2Q14254 428 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 LRRC36Q1X8D7 754 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 LYPLAL1Q5VWZ2 237 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 OTOP3Q7RTS5 596 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 NECAB2Q7Z6G3 386 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC41A1Q8IVJ1 513 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 HS6ST3Q8IZP7 471 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SNX31Q8N9S9 440 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 KYQ8NBH2 561 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 RIN3Q8TB24 985 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 KBTBD7Q8WVZ9 684 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SH3KBP1Q96B97 665 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TRMOQ9BU70 441 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 ASPSCR1Q9BZE9 553 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 SHCBP1LQ9BZQ2 653 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 CIPCQ9C0C6 399 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 POMKQ9H5K3 350 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 THG1LQ9NWX6 298 aaKnown RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TCAF1Q9Y4C2 921 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TNPO3Q9Y5L0 923 aaKnown RBP5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 TEX264Q9Y6I9 313 aa5.37□□□□□ -1.55
SMNDC1-202ENST00000369603 RNF103-CHMP3A0A140T963 221 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 C9IYK1 514 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ABLIM1O14639 778 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 HDAC3O15379 428 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MGRN1O60291 552 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 TRIM16O95361 564 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SERPINA6P08185 405 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CCDC166P0CW27 439 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 HSPA1AP0DMV8 641 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 HSPA1BP0DMV9 641 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ACADSP16219 412 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ECHS1P30084 290 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CORO1AP31146 461 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 TM4SF4P48230 202 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CCNHP51946 323 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MLLT6P55198 1093 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GNA12Q03113 381 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GALNT2Q10471 571 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SFSWAPQ12872 951 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GPR17Q13304 367 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 C6orf10Q5SRN2 563 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 STXBP5Q5T5C0 1151 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CACHD1Q5VU97 1274 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SDE2Q6IQ49 451 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ERAP2Q6P179 960 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 HFE2Q6ZVN8 426 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 TBC1D19Q8N5T2 526 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 NETO2Q8NC67 525 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms