RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FTCDO95954 541 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CD160O95971 181 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 UBTFL6P0CB48 400 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 KRT5P13647 590 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TAC1P20366 129 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TNFAIP3P21580 790 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 HMOX2P30519 316 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 BASP1P80723 227 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 YWHAHQ04917 246 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TWF1Q12792 350 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ASPHQ12797 758 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 LMBRD2Q68DH5 695 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ARHGEF18Q6ZSZ5 1173 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 IRF2BP2Q7Z5L9 587 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 DNAJB7Q7Z6W7 309 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 SLFN11Q7Z7L1 901 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CMTM8Q8IZV2 173 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 APPL2Q8NEU8 664 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 SLC7A14Q8TBB6 771 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ATL1Q8WXF7 558 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 HPDLQ96IR7 371 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 MRGPRX3Q96LB0 322 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 SERPINB12Q96P63 405 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 BTBD10Q9BSF8 475 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 EBF1Q9UH73 591 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 MTUS1Q9ULD2 1270 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 C2CD2LO14523 706 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ARHGAP33O14559 1287 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 PFDN6O15212 129 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 GSC2O15499 205 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 UCHL3P15374 230 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 GSSP48637 474 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CDK9P50750 372 aaKnown RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 NADSYN1Q6IA69 706 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 GRASPQ7Z6J2 395 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 SLC51BQ86UW2 128 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 GOLM1Q8NBJ4 401 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 DDHD1Q8NEL9 900 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 UBLCP1Q8WVY7 318 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 TTC9Q92623 222 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 TMEM169Q96HH4 297 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ADPGKQ9BRR6 497 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 DUSP16Q9BY84 665 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 UBE2TQ9NPD8 197 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CLIC5Q9NZA1 410 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 DNAJC12Q9UKB3 198 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ERVK-11Q9UQG0 969 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ATMQ13315 3056 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 C2orf78A6NCI8 922 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 TRIM64CA6NLI5 447 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 PAPSS1O43252 624 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 GJB3O75712 270 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 B3GAT3O94766 335 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 HLA-DRAP01903 254 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 SERPING1P05155 500 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 URODP06132 367 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ALDH3B2P48448 385 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 THOP1P52888 689 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ANKRD20A4Q4UJ75 823 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 OVOS1Q6IE37 1185 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ZDHHC24Q6UX98 284 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 RBM44Q6ZP01 1051 aaKnown RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 NEK10Q6ZWH5 1172 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 FAM35AQ86V20 835 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ADGRF2Q8IZF7 708 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ARFGAP1Q8N6T3 406 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ZFP28Q8NHY6 868 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 HASPINQ8TF76 798 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CHAC2Q8WUX2 184 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ARMC1Q9NVT9 282 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 C6orf203Q9P0P8 240 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 GNPTGQ9UJJ9 305 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 FBXO4Q9UKT5 387 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF711Q9Y462 761 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 hCG_2014768A0A024R1R8 64 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 RGS16O15492 202 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 AQP9O43315 295 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CCDC22O60826 627 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ANPEPP15144 967 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CTRB1P17538 263 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 KRT4P19013 534 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CDH2P19022 906 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 IFI35P80217 286 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CTRB2Q6GPI1 263 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 RFWD3Q6PCD5 774 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 DSTYKQ6XUX3 929 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 KYAT3Q6YP21 454 aaKnown RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 WDR75Q8IWA0 830 aaKnown RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 SFTPA1Q8IWL2 248 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 CBARPQ8N350 705 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 OSCP1Q8WVF1 389 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 SMARCD2Q92925 531 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 KAT5Q92993 513 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 E2F7Q96AV8 911 aa6.98□□□□□ -1.29
CSDE1-204ENST00000369530 NMD3Q96D46 503 aaKnown RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 DNAJC1Q96KC8 554 aaKnown RBP6.98□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF518BQ9C0D4 1074 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms