RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 VPS37AQ8NEZ2 397 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 RNF141Q8WVD5 230 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ATG4AQ8WYN0 398 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 FAF2Q96CS3 445 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 FUT8Q9BYC5 575 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 OSBPL6Q9BZF3 934 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 FBXO44Q9H4M3 255 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 PLEKHA4Q9H4M7 779 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 GSX1Q9H4S2 264 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 VIPAS39Q9H9C1 493 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 RC3H2Q9HBD1 1191 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 MAN1C1Q9NR34 630 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 RCOR3Q9P2K3 495 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 NFU1Q9UMS0 254 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 DRG1Q9Y295 367 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 R3HDM2Q9Y2K5 976 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 SF3B6Q9Y3B4 125 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 FANCMQ8IYD8 2048 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ZNF638Q14966 1978 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 GREB1Q4ZG55 1949 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 FAM186AA6NE01 2351 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 M0QYT0 321 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 NDC80O14777 642 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CST8O60676 142 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 IL33O95760 270 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 EFEMP2O95967 443 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 PDGFBP01127 241 aaPredicted RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 OR4Q2P0C623 313 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 ZFXP17010 805 aaPredicted RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 LAG3P18627 525 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 TGM2P21980 687 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CYP2F1P24903 491 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 GPR17Q13304 367 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 TDGQ13569 410 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 SNX1Q13596 522 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CASP8Q14790 479 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 BROXQ5VW32 411 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 TMC3Q7Z5M5 1100 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CCDC103Q8IW40 242 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 RNF168Q8IYW5 571 aaPredicted RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 GOLGA6L1Q8N7Z2 621 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CCDC89Q8N998 374 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 IGSF21Q96ID5 467 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CEP295NLQ96MC4 621 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 ZNF558Q96NG5 402 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 PCDH18Q9HCL0 1135 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 STK39Q9UEW8 545 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 RAB23Q9ULC3 237 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 FZD10Q9ULW2 581 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 NT5C1B-RDH14C9J2C7 533 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 DAPK3O43293 454 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CD48P09326 243 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 SNRPBP14678 240 aaKnown RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 ECHS1P30084 290 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 PBX3P40426 434 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 KCNJ1P48048 391 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 ZNF135P52742 658 aaPredicted RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 ADCY2Q08462 1091 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 CALCOCO2Q13137 446 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 GPS2Q13227 327 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 RAB6CQ53S08 254 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 RTP2Q5QGT7 225 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 SPOUT1Q5T280 376 aaKnown RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 GPR158Q5T848 1215 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 OTUD1Q5VV17 481 aaPredicted RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 OTOP3Q7RTS5 596 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 TMEM173Q86WV6 379 aaPredicted RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 SCN4BQ8IWT1 228 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 NUP93Q8N1F7 819 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 ARHGAP18Q8N392 663 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 MREGQ8N565 214 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 BBOF1Q8ND07 529 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 SPPL3Q8TCT6 385 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 NDRG1Q92597 394 aaKnown RBP8.98□□□□□ -0.97
TPM3-213ENST00000368545 NTAN1Q96AB6 310 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 LRRC45Q96CN5 670 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 RNF157Q96PX1 679 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 FMO2Q99518 471 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 RAB6CQ9H0N0 254 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 DPH5Q9H2P9 285 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 ADAM7Q9H2U9 754 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 GPR27Q9NS67 375 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 ABCC13Q9NSE7 274 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 COMMD8Q9NX08 183 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 MTRRQ9UBK8 725 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 NAALADL1Q9UQQ1 740 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
TPM3-213ENST00000368545 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 MTMR11A4FU01 709 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 APOL1O14791 398 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 MCF2LO15068 1137 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 LINC01565O15544 149 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 TCEA3O75764 348 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SLITRK5O94991 958 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 RTN3O95197 1032 aaPredicted RBP8.97□□□□□ -0.97
TPM3-213ENST00000368545 FYNP06241 537 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 PPM1AP35813 382 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 ARL4AP40617 200 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 NRIP1P48552 1158 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms