RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 NSMCE3Q96MG7 304 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 KLHL32Q96NJ5 620 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 NUDCD1Q96RS6 583 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 OMDQ99983 421 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 POLR1EQ9GZS1 481 aaKnown RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 PABPC3Q9H361 631 aaKnown RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 USP29Q9HBJ7 922 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 NOD2Q9HC29 1040 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 HAUS2Q9NVX0 235 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 FBXL12Q9NXK8 326 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 TTC7AQ9ULT0 858 aaPredicted RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 CYP8B1Q9UNU6 501 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 ATP8A1Q9Y2Q0 1164 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 H0Y858 1186 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 URI1O94763 535 aaPredicted RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 STK10O94804 968 aaKnown RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 ADH1BP00325 375 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 CR2P20023 1033 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 C5AR1P21730 350 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 PAFAH1B1P43034 410 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 CSNK1DP48730 415 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 GDF10P55107 478 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 AP1S1P61966 158 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 BCL2L1Q07817 233 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 SRSF5Q13243 272 aaKnown RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 TTC31Q49AM3 519 aaPredicted RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 NCEH1Q6PIU2 408 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 TAB3Q8N5C8 712 aaPredicted RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 AADATQ8N5Z0 425 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 FAM160A2Q8N612 972 aaPredicted RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 TMIEQ8NEW7 156 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 PDCD6IPQ8WUM4 868 aaKnown RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 TEKT5Q96M29 485 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 FRMD8P1Q9BZ68 369 aaPredicted RBP14.06□□□□□ -0.16
TPM3-211ENST00000368531 GLOD4Q9HC38 313 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 DYRK4Q9NR20 520 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 SERGEFQ9UGK8 458 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 RSPH14Q9UHP6 348 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 NCKAP1Q9Y2A7 1128 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 PCDHGC4Q9Y5F7 938 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 A0A0C4DFX4 3053 aa14.06□□□□□ -0.16
TPM3-211ENST00000368531 CEP192Q8TEP8 1941 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 PDE2AO00408 941 aaPredicted RBP14.05□□□□□ -0.16
TPM3-211ENST00000368531 IFNB1P01574 187 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ETS1P14921 441 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 NFKB1P19838 968 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 HOXA6P31267 233 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 CD68P34810 354 aaPredicted RBP14.05□□□□□ -0.16
TPM3-211ENST00000368531 CD86P42081 329 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 TPMTP51580 245 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 CNTN1Q12860 1018 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 OASLQ15646 514 aaKnown RBP14.05□□□□□ -0.16
TPM3-211ENST00000368531 USP39Q53GS9 565 aaKnown RBP14.05□□□□□ -0.16
TPM3-211ENST00000368531 ZNF805Q5CZA5 627 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 LRRC73Q5JTD7 316 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ANKRD20A2Q5SQ80 823 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 CFAP58Q5T655 872 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ANKRD20A1Q5TYW2 823 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ANKRD20A3Q5VUR7 823 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 GSTA5Q7RTV2 222 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 WDR5BQ86VZ2 330 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 LONP2Q86WA8 852 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 SPATA22Q8NHS9 363 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ARRDC2Q8TBH0 407 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 NKD2Q969F2 451 aaPredicted RBP14.05□□□□□ -0.16
TPM3-211ENST00000368531 VOPP1Q96AW1 172 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 LRIG1Q96JA1 1093 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 TUBGCP5Q96RT8 1024 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 RBM15Q96T37 977 aaKnown RBP eCLIP14.05□□□□□ -0.16
TPM3-211ENST00000368531 VAT1Q99536 393 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 CPEB1Q9BZB8 566 aaKnown RBP14.05□□□□□ -0.16
TPM3-211ENST00000368531 NEUROG2Q9H2A3 272 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 SUV39H2Q9H5I1 410 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ATP13A3Q9H7F0 1226 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ITM2CQ9NQX7 267 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 HOMER3Q9NSC5 361 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 UBP1Q9NZI7 540 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 AMACRQ9UHK6 382 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 TRHDEQ9UKU6 1024 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 ZDBF2Q9HCK1 2354 aa14.05□□□□□ -0.16
TPM3-211ENST00000368531 GOLGA6L10A0A0M3HER8 536 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.04□□□□□ -0.16
TPM3-211ENST00000368531 CFAP69A5D8W1 941 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 PRR23AA6NEV1 266 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 FAM47DPA6NHR8 397 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 KIF2AO00139 706 aaPredicted RBP14.04□□□□□ -0.16
TPM3-211ENST00000368531 PMPCBO75439 489 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 ITGAVP06756 1048 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 SERPINA4P29622 427 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 DRD3P35462 400 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 NUBP1P53384 320 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 ZBTB16Q05516 673 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 TRAF2Q12933 501 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 IHHQ14623 411 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 GRM3Q14832 879 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 PCSK7Q16549 785 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 TTC27Q6P3X3 843 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms