RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CDRT15Q96T59 188 aa18.3■□□□□ 0.52
UBQLN4-201ENST00000368309 CYP4F12Q9HCS2 524 aa18.3■□□□□ 0.52
UBQLN4-201ENST00000368309 ENTPD7Q9NQZ7 604 aa18.3■□□□□ 0.52
UBQLN4-201ENST00000368309 M0QZQ0 153 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 CCL22O00626 93 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 TNFRSF10BO14763 440 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 PRDX6P30041 224 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 ATXN3P54252 364 aaPredicted RBP18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 TUSC3Q13454 348 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 SLC39A12Q504Y0 691 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 NEPROQ6NW34 567 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 CNTN4Q8IWV2 1026 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 GDPD5Q8WTR4 605 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 FGF10O15520 208 aaPredicted RBP18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 ZNF623O75123 536 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 GPR15P49685 360 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 SLC12A2P55011 1212 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 DDR2Q16832 855 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 FAM219BQ5XKK7 198 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 KLHDC8BQ8IXV7 354 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 DSELQ8IZU8 1212 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 LZTR1Q8N653 840 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 TXNDC5Q8NBS9 432 aaKnown RBP18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 RCN3Q96D15 328 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 SMOC2Q9H3U7 446 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 RRAGCQ9HB90 399 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 CDYLQ9Y232 598 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 CD151P48509 253 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 PKNOX1P55347 436 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 YWHAHQ04917 246 aaPredicted RBP18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 CYLC2Q14093 348 aaPredicted RBP18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 TRIP10Q15642 601 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 KYQ8NBH2 561 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 GPR152Q8TDT2 470 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 USP13Q92995 863 aaPredicted RBP18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 NT5MQ9NPB1 228 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 TREX1Q9NSU2 369 aa18.29■□□□□ 0.52
UBQLN4-201ENST00000368309 J3KR12 359 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 ARSAP15289 507 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 PLK1P53350 603 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 LDB1Q86U70 411 aaPredicted RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 ZNF354CQ86Y25 554 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 UBE2OQ9C0C9 1292 aaKnown RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 DSEQ9UL01 958 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 B4GALT3O60512 393 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 LYNP07948 512 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 ENO3P13929 434 aaPredicted RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 TRIM32Q13049 653 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 SH2D4BQ5SQS7 431 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 SDCCAG8Q86SQ7 713 aaPredicted RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 RTL3Q8N8U3 475 aaKnown RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 PABPC5Q96DU9 382 aaKnown RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 MRPL46Q9H2W6 279 aaKnown RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 NOL6Q9H6R4 1146 aaKnown RBP18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 PIDD1Q9HB75 910 aa18.28■□□□□ 0.52
UBQLN4-201ENST00000368309 STX16-NPEPL1H3BU86 382 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 SMIM24O75264 130 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 COL6A2P12110 1019 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 HOXC13P31276 330 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 MLLT6P55198 1093 aaPredicted RBP18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 LPIN1Q14693 890 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 MAPRE1Q15691 268 aaKnown RBP18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 PIK3R6Q5UE93 754 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 TRIM67Q6ZTA4 783 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 ADGRG6Q86SQ4 1221 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 KDM1BQ8NB78 822 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 C2CD4AQ8NCU7 369 aaPredicted RBP18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 TUBGCP5Q96RT8 1024 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 TRIM62Q9BVG3 475 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 POMKQ9H5K3 350 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 GTSE1Q9NYZ3 720 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 KCNA5P22460 613 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 PPARGP37231 505 aaPredicted RBP18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 AQP4P55087 323 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 GRIK3Q13003 919 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 KBTBD6Q86V97 674 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 SCML4Q8N228 414 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 JADE3Q92613 823 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 OLFM1Q99784 485 aa18.27■□□□□ 0.52
UBQLN4-201ENST00000368309 KCNU1A8MYU2 1149 aa18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 KPNA6O60684 536 aa18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 RNASEH1O60930 286 aaKnown RBP18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 TBX18O95935 607 aa18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 IGHA2P01877 340 aa18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 HAPLN1P10915 354 aaPredicted RBP18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 PAMP19021 973 aa18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 PTAR1Q7Z6K3 402 aaPredicted RBP18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 ZNF280BQ86YH2 543 aa18.27■□□□□ 0.51
UBQLN4-201ENST00000368309 HTTP42858 3142 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 CNTN5O94779 1100 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 CPB1P15086 417 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 CD86P42081 329 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 THOP1P52888 689 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 SLC10A7Q0GE19 358 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 TIGD7Q6NT04 549 aaPredicted RBP18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 PDSS2Q86YH6 399 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 CNDP1Q96KN2 507 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 SUSD3Q96L08 255 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 KLHL4Q9C0H6 718 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms