RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NEK3P51956 506 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 GBE1Q04446 702 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 GALNT2Q10471 571 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 LBRQ14739 615 aaKnown RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 RSPO4Q2I0M5 234 aaPredicted RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 TMCO4Q5TGY1 634 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 ATPAF2Q8N5M1 289 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 PLD5Q8N7P1 536 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 RNF25Q96BH1 459 aaPredicted RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 NSMCE3Q96MG7 304 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 KLHL32Q96NJ5 620 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 EDEM2Q9BV94 578 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 OSBPL1AQ9BXW6 950 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 DDX56Q9NY93 547 aaKnown RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 C16orf96A6NNT2 1141 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 GNSP15586 552 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 ENGP17813 658 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 GARSP41250 739 aaKnown RBP22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 CSNK1DP48730 415 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 MARCKSL1P49006 195 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 RAD51Q06609 339 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 TAZQ16635 292 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 SLC9A4Q6AI14 798 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 MFSD7Q6UXD7 560 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 GDPD4Q6W3E5 623 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 TRIM69Q86WT6 500 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 NETO1Q8TDF5 533 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 PSKH2Q96QS6 385 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 GRPEL1Q9HAV7 217 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 PREBQ9HCU5 417 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 TM9SF3Q9HD45 589 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 TRIM10Q9UDY6 481 aa22.73■■□□□ 1.23
ECHDC1-203ENST00000368291 SPINT1O43278 529 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 GJB3O75712 270 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 PIGNO95427 931 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 ABL2P42684 1182 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 LIMK1P53667 647 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 BNC1Q01954 994 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 NSUN2Q08J23 767 aaKnown RBP eCLIP22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 CCDC15Q0P6D6 951 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 DAAM2Q86T65 1068 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 KIAA1328Q86T90 577 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 LRRC49Q8IUZ0 686 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 PGBD5Q8N414 524 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 CINPQ9BW66 212 aaPredicted RBP22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 DLL3Q9NYJ7 618 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 DTLQ9NZJ0 730 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 SEPT3Q9UH03 358 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 FADS3Q9Y5Q0 445 aa22.72■■□□□ 1.23
ECHDC1-203ENST00000368291 WNT9AO14904 365 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 CDKN2BP42772 138 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 STPG1Q5TH74 334 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 NEK5Q6P3R8 708 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 FBXL19Q6PCT2 694 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 SRLQ86TD4 932 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 LRRC57Q8N9N7 239 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 LRRN4Q8WUT4 740 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 KRT35Q92764 455 aa22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 CALR3Q96L12 384 aaKnown RBP22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 ZFR2Q9UPR6 939 aaKnown RBP22.71■■□□□ 1.23
ECHDC1-203ENST00000368291 AP1G1O43747 822 aa22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 RNGTTO60942 597 aaKnown RBP22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 CR2P20023 1033 aa22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 MAT2AP31153 395 aaKnown RBP22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 CSNK1EP49674 416 aaKnown RBP22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 KATNAL2Q8IYT4 538 aa22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 SLC6A18Q96N87 628 aa22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 TSGA13Q96PP4 275 aa22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 DKK3Q9UBP4 350 aa22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 TPX2Q9ULW0 747 aaKnown RBP22.7■■□□□ 1.22
ECHDC1-203ENST00000368291 TSPAN11A1L157 253 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 TTC24A2A3L6 582 aaPredicted RBP22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 GRID2IPA4D2P6 1211 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 ARHGAP33O14559 1287 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 SLC30A4O14863 429 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 GRIK2Q13002 908 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 GRM3Q14832 879 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 IFI16Q16666 785 aaKnown RBP22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 LAYNQ6UX15 382 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 HORMAD1Q86X24 394 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 TEX26Q8N6G2 289 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 MAML1Q92585 1016 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 TUBGCP5Q96RT8 1024 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 SUV39H2Q9H5I1 410 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 GGT7Q9UJ14 662 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 CDV3Q9UKY7 258 aaKnown RBP22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 ADGRG1Q9Y653 693 aa22.69■■□□□ 1.22
ECHDC1-203ENST00000368291 DNAH14Q0VDD8 3507 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 A0A1W2PQU0 124 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 C4orf47A7E2U8 309 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 APOL1O14791 398 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 TM4SF5O14894 197 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 AREL1O15033 823 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 WNT1P04628 370 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 TIMP2P16035 220 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 CCNCP24863 283 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 GRIA4P48058 902 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 SCNN1BP51168 640 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 RENBPP51606 427 aa22.68■■□□□ 1.22
ECHDC1-203ENST00000368291 AFF3P51826 1226 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms