RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 EBNA1BP2Q99848 306 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 DPEP2Q9H4A9 486 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 GLOD4Q9HC38 313 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 OPTCQ9UBM4 332 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 M0R2N6 131 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 UGT2B4P06133 528 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 FSTL1Q12841 308 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 PTPRNQ16849 979 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 MPPE1Q53F39 396 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 STXBP5Q5T5C0 1151 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 STAG3L4Q8TBR4 150 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 RPL10LQ96L21 214 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 GPN3Q9UHW5 284 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 FBXO5Q9UKT4 447 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 TNPO3Q9Y5L0 923 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 C16orf96A6NNT2 1141 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 NR5A2O00482 541 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 LTA4HP09960 611 aaKnown RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 RHOQP17081 205 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ALAS2P22557 587 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 MAD2L1Q13257 205 aaPredicted RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 POTEHQ6S545 545 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 KYAT3Q6YP21 454 aaKnown RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 BBS7Q8IWZ6 715 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CLYBLQ8N0X4 340 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 FAXDC2Q96IV6 333 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 FBXO6Q9NRD1 293 aaPredicted RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 TAGLN3Q9UI15 199 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 LRRC37A3O60309 1634 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 HNRNPRO43390 633 aaKnown RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 SP2Q02086 613 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 OCA2Q04671 838 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 AGKQ53H12 422 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CIR1Q86X95 450 aaPredicted RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 BCAS3Q9H6U6 928 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 IL1RAPL1Q9NZN1 696 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 MYO9BQ13459 2157 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CLUHO75153 1309 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ALADP13716 330 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 TACR2P21452 398 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 TTPAP49638 278 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 IRF8Q02556 426 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 RAB30Q15771 203 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 MON1BQ7L1V2 547 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 LMO7Q8WWI1 1683 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ART4Q93070 314 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 VTI1BQ9UEU0 232 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 BLOC1S6Q9UL45 172 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ZNF839A8K0R7 811 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ANXA5P08758 320 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 LPOP22079 712 aaPredicted RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ACSM2AQ08AH3 577 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CBX2Q14781 532 aaPredicted RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 RASA2Q15283 850 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 LRRC73Q5JTD7 316 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ACSM2BQ68CK6 577 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 DUPD1Q68J44 220 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ECHDC2Q86YB7 292 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ASB2Q96Q27 587 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ACSS3Q9H6R3 686 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CD84Q9UIB8 345 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 C1RP00736 705 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 KCTD19Q17RG1 926 aaPredicted RBP11.69□□□□□ -0.54
SYNE1-204ENST00000367248 TEX9Q8N6V9 391 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 SH3GL1Q99961 368 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CPQQ9Y646 472 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 GMFGO60234 142 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 SLC1A6P48664 564 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 SULT2A1Q06520 285 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 TAF8Q7Z7C8 310 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 BADQ92934 168 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 PHF21AQ96BD5 680 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 REPS1Q96D71 796 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 ARHGEF4Q9NR80 690 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 SIRPGQ9P1W8 387 aa11.69□□□□□ -0.54
SYNE1-204ENST00000367248 A0A087X1B8 175 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 QSOX1O00391 747 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ACSL4O60488 711 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ABHD2P08910 425 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 FAM151BQ6UXP7 276 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 GPSM1Q86YR5 675 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 TSEN2Q8NCE0 465 aaKnown RBP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 CEP70Q8NHQ1 597 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 FAM120BQ96EK7 910 aaKnown RBP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 FUBP3Q96I24 572 aaKnown RBP eCLIP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 COPS8Q99627 209 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 HAO1Q9UJM8 370 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 A0A1W2PQ45 241 aaPredicted RBP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 A0A1W2PQY0 241 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 F2P00734 622 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 KCNA5P22460 613 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 PSMA4P25789 261 aaKnown RBP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 POU1F1P28069 291 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 CHRNB3Q05901 458 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ARHGAP17Q68EM7 881 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms