RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 PLIN3O60664 434 aa9.4□□□□□ -0.9
CNIH4-202ENST00000366857 GNA12Q03113 381 aa9.4□□□□□ -0.9
CNIH4-202ENST00000366857 BTKQ06187 659 aa9.4□□□□□ -0.9
CNIH4-202ENST00000366857 EFEMP1Q12805 493 aa9.4□□□□□ -0.9
CNIH4-202ENST00000366857 UHMK1Q8TAS1 419 aaKnown RBP9.4□□□□□ -0.9
CNIH4-202ENST00000366857 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
CNIH4-202ENST00000366857 OMDQ99983 421 aa9.4□□□□□ -0.9
CNIH4-202ENST00000366857 SPENQ96T58 3664 aaKnown RBP9.4□□□□□ -0.91
CNIH4-202ENST00000366857 PIKFYVEQ9Y2I7 2098 aa9.4□□□□□ -0.91
CNIH4-202ENST00000366857 GLP2RO95838 553 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 BPGMP07738 259 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 GSTA1P08263 222 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 FDXRP22570 491 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 PPM1AP35813 382 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ZFP36L2P47974 494 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ALDH7A1P49419 539 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 HECTD3Q5T447 861 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 C8orf82Q6P1X6 216 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 PAXIP1Q6ZW49 1069 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 TMEM199Q8N511 208 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 HMGCLL1Q8TB92 370 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ISG20Q96AZ6 181 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 CYP2S1Q96SQ9 504 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 OLFM1Q99784 485 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 INSL6Q9Y581 213 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ARHGAP42A6NI28 874 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 SGTAO43765 313 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 CLDN11O75508 207 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 IFNB1P01574 187 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 PYGBP11216 843 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 CORO1AP31146 461 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 DSC2Q02487 901 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 NECAB2Q7Z6G3 386 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 SRPK1Q96SB4 655 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 KLHL14Q9P2G3 628 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 PLA2G4CQ9UP65 541 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 MTO1Q9Y2Z2 717 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 KCNC1P48547 511 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 MTM1Q13496 603 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ARFGAP2Q8N6H7 521 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 STYXQ8WUJ0 223 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 USP13Q92995 863 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 S1PR5Q9H228 398 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 POPDC3Q9HBV1 291 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 SLCO1B3Q9NPD5 702 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ERVK-10P10266 1014 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 MZF1P28698 734 aaPredicted RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 SLC1A2P43004 574 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 IRF9Q00978 393 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 CREB5Q02930 508 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 UGT3A2Q3SY77 523 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ESRP1Q6NXG1 681 aaKnown RBP9.39□□□□□ -0.91
CNIH4-202ENST00000366857 RFWD3Q6PCD5 774 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ADGRD2Q7Z7M1 963 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 LINC00523Q86TU6 105 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 MCOLN1Q9GZU1 580 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 TNFRSF12AQ9NP84 129 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 ATP11BQ9Y2G3 1177 aa9.39□□□□□ -0.91
CNIH4-202ENST00000366857 A0A1B0GVM2 712 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 TCAF2A6NFQ2 919 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 AP3B1O00203 1094 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 DNAJC8O75937 253 aaPredicted RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 JCHAINP01591 159 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 F7P08709 466 aaPredicted RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 MTHFD2P13995 350 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 PHBP35232 272 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 SSR1P43307 286 aaKnown RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 RPS24P62847 133 aaKnown RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 KYAT3Q6YP21 454 aaKnown RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 TAOK1Q7L7X3 1001 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 SRRM1Q8IYB3 904 aaKnown RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 ASIC4Q96FT7 647 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 CCDC106Q9BWC9 280 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 NOD2Q9HC29 1040 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 ARHGEF3Q9NR81 526 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 PIH1D1Q9NWS0 290 aaKnown RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 MARCH4Q9P2E8 410 aaPredicted RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 NFKBIL1Q9UBC1 381 aaPredicted RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 LNPEPQ9UIQ6 1025 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 PCM1Q15154 2024 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 TPP1O14773 563 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 USP12O75317 370 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 CD1EP15812 388 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 SKIV2L2P42285 1042 aaKnown RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 FUT11Q495W5 492 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 RNF165Q6ZSG1 346 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 KIAA0408Q6ZU52 694 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 HCFC1R1Q9NWW0 138 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 OTOL1A6NHN0 477 aaPredicted RBP9.38□□□□□ -0.91
CNIH4-202ENST00000366857 C2CD2LO14523 706 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 CAPN9O14815 690 aa9.38□□□□□ -0.91
CNIH4-202ENST00000366857 ATP5DP30049 168 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms