RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 DNAJC3Q13217 504 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CYTH1Q15438 398 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ASIC2Q16515 512 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CA9Q16790 459 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZSCAN30Q86W11 494 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MARCH9Q86YJ5 346 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 IFT43Q96FT9 208 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MYOCQ99972 504 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 OSBPL1AQ9BXW6 950 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ISCUQ9H1K1 167 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CATSPERBQ9H7T0 1116 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CAAP1Q9H8G2 361 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PDFQ9HBH1 243 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DKK4Q9UBT3 224 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 POM121BA6NF01 834 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 EIF3CLB5ME19 914 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KRIT1O00522 736 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 UGT2B4P06133 528 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DGKAP23743 735 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PSMA2P25787 234 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 NDST2P52849 883 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ERMARDQ5T6L9 678 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HGSNATQ68CP4 663 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DHRS13Q6UX07 377 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GDPD4Q6W3E5 623 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KYAT3Q6YP21 454 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 Q6ZSR6 202 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KLHL32Q96NJ5 620 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 EIF3CQ99613 913 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CPEB1Q9BZB8 566 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GPATCH2LQ9NWQ4 482 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 UCKL1Q9NWZ5 548 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DKK3Q9UBP4 350 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LHX3Q9UBR4 397 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 AP4E1Q9UPM8 1137 aa13.87□□□□□ -0.19
TNFRSF1A-202ENST00000366159 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 IGLON5A6NGN9 336 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TRIM38O00635 465 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CDK4P11802 303 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SKILP12757 684 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CKMT2P17540 419 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ACP1P24666 158 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KLHL30Q0D2K2 578 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZNF211Q13398 564 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FZD2Q14332 565 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TMPRSS12Q86WS5 348 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PSTKQ8IV42 348 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ARHGAP12Q8IWW6 846 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 NETO2Q8NC67 525 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HCAR2Q8TDS4 363 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CENPTQ96BT3 561 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GDAP1L1Q96MZ0 367 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KCTD15Q96SI1 283 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SNRNP25Q9BV90 132 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SLC39A8Q9C0K1 460 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CNOT8Q9UFF9 292 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ITM2BQ9Y287 266 aa13.86□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SPTY2D1-AS1A0A0U1RR47 76 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TSPAN11A1L157 253 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SYCE3A1L190 88 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 A6NNZ2 444 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 J3KR12 359 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 INSIG1O15503 277 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SIGLEC6O43699 453 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PRAMEF11O60813 436 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SDC3O75056 442 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LRCH4O75427 683 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RFPL3O75679 317 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PIAS2O75928 621 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SERPINC1P01008 464 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TIMP2P16035 220 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MIPP30301 263 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HCAR3P49019 387 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TPI1P60174 286 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PFN3P60673 137 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RHOAP61586 193 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FANCCQ00597 558 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ILKQ13418 452 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TPRG1LQ5T0D9 272 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LUZP1Q86V48 1076 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DENND6BQ8NEG7 585 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 OR4C6Q8NH72 309 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SYN2Q92777 582 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CALN1Q9BXU9 219 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DHX35Q9H5Z1 703 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PCSK1NQ9UHG2 260 aa13.85□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZFYVE26Q68DK2 2539 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FAM149AA5PLN7 773 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TRABD2BA6NFA1 517 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 IGSF6O95976 241 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms