RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CAPRIN2Q6IMN6 1127 aaKnown RBP4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 PRSS45Q7RTY3 260 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 CPOQ8IVL8 374 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 MCPH1Q8NEM0 835 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 TMEM163Q8TC26 289 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 RUFY2Q8WXA3 655 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 RAB40AQ8WXH6 277 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 TRIM63Q969Q1 353 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 TXNDC15Q96J42 360 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 ZSCAN31Q96LW9 406 aaPredicted RBP4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 TM6SF1Q9BZW5 370 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 CDT1Q9H211 546 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 TTYH1Q9H313 450 aaPredicted RBP4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 ENTPD7Q9NQZ7 604 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 TMEM51Q9NW97 253 aa4.74□□□□□ -1.65
RNU4-28P-201ENST00000364739 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 IFITM10A6NMD0 228 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 EIF3FO00303 357 aaPredicted RBP4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 TIMM23O14925 209 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 KIF1CO43896 1103 aaKnown RBP4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 ATP2C2O75185 946 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 CHRM4P08173 479 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 FGF3P11487 239 aaPredicted RBP4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 TTKP33981 857 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 LIFRP42702 1097 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 MXI1P50539 228 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 PPFIA1Q13136 1202 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 IZUMO4Q1ZYL8 232 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 TYW3Q6IPR3 259 aaKnown RBP4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 CES5AQ6NT32 575 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 IL20RBQ6UXL0 311 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 ARMC9Q7Z3E5 817 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 MB21D2Q8IYB1 491 aaPredicted RBP4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 CPXM2Q8N436 756 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 RNF183Q96D59 192 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 SLC25A33Q9BSK2 321 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 ISCA1Q9BUE6 129 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 PHF7Q9BWX1 381 aaPredicted RBP4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 TAOK3Q9H2K8 898 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 EPHX3Q9H6B9 360 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 ALKBH4Q9NXW9 302 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 SELENONQ9NZV5 590 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 CTNNAL1Q9UBT7 734 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 SUFUQ9UMX1 484 aa4.73□□□□□ -1.65
RNU4-28P-201ENST00000364739 IGLV5-52A0A0A0MRZ9 124 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 A0A1B0GVM2 712 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 PABPN1LA6NDY0 278 aaKnown RBP4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 PRSS44E7EML9 344 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 KCNJ13O60928 360 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 PPP1R3DO95685 299 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 TFPIP10646 304 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 FCGR1AP12314 374 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 EDN2P20800 178 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 C21orf33P30042 268 aaPredicted RBP4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 CCR5P51681 352 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 FAM27E3Q08E93 113 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 EDRF1Q3B7T1 1238 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 PLEKHO1Q53GL0 409 aaPredicted RBP4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 RETSATQ6NUM9 610 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 C8orf82Q6P1X6 216 aaPredicted RBP4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 FIZ1Q96SL8 496 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 EYA3Q99504 573 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 CD93Q9NPY3 652 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
RNU4-28P-201ENST00000364739 DYTNA2CJ06 578 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 TYW5A2RUC4 315 aaKnown RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 ACOT8O14734 319 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 SERPINI2O75830 405 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 RGS11O94810 467 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 CNTFP26441 200 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 PIGAP37287 484 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 CENPAP49450 140 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 DDR1Q08345 913 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 ZNF667Q5HYK9 610 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 WDR45BQ5MNZ6 344 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 C17orf99Q6UX52 265 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 C16orf82Q7Z2V1 217 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 ADGRG6Q86SQ4 1221 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 PATL1Q86TB9 770 aaKnown RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 DENND6AQ8IWF6 608 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 USP38Q8NB14 1042 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 LSM14AQ8ND56 463 aaKnown RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 ARRDC2Q8TBH0 407 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 FAM84BQ96KN1 310 aaPredicted RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 CD180Q99467 661 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 NUF2Q9BZD4 464 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 IL25Q9H293 177 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 C6orf106Q9H6K1 298 aaPredicted RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 SPATS2LQ9NUQ6 558 aaKnown RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 IFT80Q9P2H3 777 aaPredicted RBP4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 HSF4Q9ULV5 492 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 PCDHGB1Q9Y5G3 927 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 SCN5AQ14524 2016 aa4.71□□□□□ -1.66
RNU4-28P-201ENST00000364739 C17orf113A0A1B0GUU1 675 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 SRRM3A6NNA2 597 aaPredicted RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 PRR23D1E9PI22 279 aaPredicted RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 PRR23D2P0DMB1 279 aaPredicted RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 SRD5A1P18405 259 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms