RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ALDH18A1P54886 795 aaKnown RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 DRG2P55039 364 aaKnown RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM3BP58499 235 aaPredicted RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 TRIM60Q495X7 471 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 KLHDC7AQ5VTJ3 777 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 MTFR2Q6P444 385 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 LCTLQ6UWM7 567 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 GPT2Q8TD30 523 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 OTUD7AQ8TE49 926 aaPredicted RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 TRIM31Q9BZY9 425 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 FKRPQ9H9S5 495 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 LIN7CQ9NUP9 197 aaKnown RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 OR6C3Q9NZP0 311 aa2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 GREB1LQ9C091 1923 aaPredicted RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 ATXN2Q99700 1313 aaKnown RBP2.15□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM234BA2RU67 622 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 GOLGA6CA6NDK9 693 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 GOLGA6BA6NDN3 693 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 DDTLA6NHG4 134 aaPredicted RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 CAPN9O14815 690 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 RFPL2O75678 378 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 TFRCP02786 760 aaKnown RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 GOLGA6DP0CG33 693 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 IRX1P78414 480 aaPredicted RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 LPIN1Q14693 890 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 ZNF239Q16600 458 aaKnown RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 RINT1Q6NUQ1 792 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 METTL7BQ6UX53 244 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 GALNT7Q86SF2 657 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 SATL1Q86VE3 508 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 P2RY8Q86VZ1 359 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 GALNT15Q8N3T1 639 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 CCDC33Q8N5R6 958 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 OTULINQ96BN8 352 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 TMEM19Q96HH6 336 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 LRRC1Q9BTT6 524 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 LHPPQ9H008 270 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 WDR13Q9H1Z4 485 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 TP63Q9H3D4 680 aaPredicted RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 MVB12BQ9H7P6 319 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 PDE11AQ9HCR9 933 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 CCDC177Q9NQR7 707 aaPredicted RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 STARD7Q9NQZ5 370 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 GOLGA6AQ9NYA3 693 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 DDX20Q9UHI6 824 aaKnown RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 CORO2BQ9UQ03 480 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 KLF2Q9Y5W3 355 aaPredicted RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 SNX9Q9Y5X1 595 aa2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 FRMPD2Q68DX3 1309 aaPredicted RBP2.14□□□□□ -2.07
RNU6-238P-201ENST00000363313 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 A8MU10 97 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 EFCAB8A8MWE9 144 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 BLOC1S5-TXNDC5H3BN57 136 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 IGLV1-44P01699 117 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 GYS1P13807 737 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 NPPBP16860 134 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 RXRAP19793 462 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 FMO5P49326 533 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 AMZ1Q400G9 498 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 FBXO38Q6PIJ6 1188 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 DSG4Q86SJ6 1040 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 TXLNBQ8N3L3 684 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 OR4N2Q8NGD1 307 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 OR10V1Q8NGI7 309 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 SLC2A12Q8TD20 617 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 C3orf30Q96M34 536 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 LINC00479Q96M42 142 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 HDHD5Q9BXW7 423 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 TAAR2Q9P1P5 351 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 AGRNO00468 2067 aa2.13□□□□□ -2.07
RNU6-238P-201ENST00000363313 hDV102S1A0JD36 115 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 J3KR12 359 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 RTL8CO15255 209 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 MID1O15344 667 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 HNRNPRO43390 633 aaKnown RBP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 WEE2P0C1S8 567 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 STT3AP46977 705 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 CENPAP49450 140 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 HOXA1P49639 335 aaPredicted RBP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 RPS6KA3P51812 740 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 KRTAP10-1P60331 282 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 CDK18Q07002 472 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 SF3A3Q12874 501 aaKnown RBP eCLIP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 GRM3Q14832 879 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 NFE2Q16621 373 aaPredicted RBP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 GXYLT1Q4G148 440 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 ATP13A5Q4VNC0 1218 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 PPP6R3Q5H9R7 873 aaPredicted RBP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 DENND6AQ8IWF6 608 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 SFTPA2Q8IWL1 248 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 SCN4BQ8IWT1 228 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 SRBD1Q8N5C6 995 aaKnown RBP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 AMER3Q8N944 861 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 KLHDC9Q8NEP7 349 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM222BQ8WU58 562 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 TMEM190Q8WZ59 177 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 TTC17Q96AE7 1141 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 TRIM15Q9C019 465 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 ERVMER34-1Q9H9K5 563 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms