RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MAFBQ9Y5Q3 323 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-201ENST00000361866 SLIT2O94813 1529 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 BTN3A1O00481 513 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 HCRTO43612 131 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ATP6V1G1O75348 118 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 GCATO75600 419 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 THP07101 528 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 FCGR1AP12314 374 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ADORA2AP29274 412 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ADRA1BP35368 520 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 NOVP48745 357 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ZNF252P-AS1Q0IIN9 211 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 SLC10A6Q3KNW5 377 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 TIGD2Q4W5G0 525 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MAP1SQ66K74 1059 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 CAND1Q86VP6 1230 aaKnown RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MCRS1Q96EZ8 462 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 SENP8Q96LD8 212 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 HBEGFQ99075 208 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ADAMTS6Q9UKP5 1117 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 TRAF6Q9Y4K3 522 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 TRAFD1O14545 582 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 FBXO21O94952 628 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 IRF1P10914 325 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 FMO4P31512 558 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 OR1G1P47890 313 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ADGRE1Q14246 886 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 FAM98BQ52LJ0 330 aaKnown RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 IL23RQ5VWK5 629 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ESRP1Q6NXG1 681 aaKnown RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 KLHDC10Q6PID8 442 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 WDTC1Q8N5D0 677 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ITFG1Q8TB96 612 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 WWOXQ9NZC7 414 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 PTTG2Q9NZH5 202 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 LRFN2Q9ULH4 789 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 FADS3Q9Y5Q0 445 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 LMO2P25791 158 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 CD86P42081 329 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 SQLEQ14534 574 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 TMEM63BQ5T3F8 832 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 SPESP1Q6UW49 350 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ARMCX6Q7L4S7 300 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 CENPLQ8N0S6 344 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 ATG16L2Q8NAA4 619 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 SPATA17Q96L03 361 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 SIGLEC10Q96LC7 697 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 QKIQ96PU8 341 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MRPL57Q9BQC6 102 aaKnown RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MINDY3Q9H8M7 445 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MPP6Q9NZW5 540 aa14.03□□□□□ -0.16
COL6A1-201ENST00000361866 MTF2Q9Y483 593 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-201ENST00000361866 PDLIM1O00151 329 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 IRF6O14896 467 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 LBPP18428 481 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 AOC1P19801 751 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 POLD3Q15054 466 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 GNASQ5JWF2 1037 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 RPS27LQ71UM5 84 aaKnown RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 UNC93AQ86WB7 457 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 PDSS2Q86YH6 399 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 HDAC10Q969S8 669 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 KLHL5Q96PQ7 755 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 PKP2Q99959 881 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 SENP6Q9GZR1 1112 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 SELENONQ9NZV5 590 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 U3KQV3 271 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 EVPLLA8MZ36 301 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 VPS26AO75436 327 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 MLNP12872 115 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 SLC5A3P53794 718 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 SLC25A52Q3SY17 297 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 CDCA2Q69YH5 1023 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 TIGD7Q6NT04 549 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 DPY19L2P1Q6NXN4 242 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 PLD6Q8N2A8 252 aaKnown RBP14.02□□□□□ -0.16
COL6A1-201ENST00000361866 OSCP1Q8WVF1 389 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 VAT1Q99536 393 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 CCDC28BQ9BUN5 200 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 BBS2Q9BXC9 721 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 SIRPGQ9P1W8 387 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 RAB26Q9ULW5 256 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 RAD54BQ9Y620 910 aa14.02□□□□□ -0.16
COL6A1-201ENST00000361866 MDM4O15151 490 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 CDH2P19022 906 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-201ENST00000361866 MRPS5P82675 430 aaKnown RBP14.02□□□□□ -0.17
COL6A1-201ENST00000361866 CDC42EP1Q00587 391 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 SOWAHAQ2M3V2 549 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 TEX44Q53QW1 395 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 ABRAXAS1Q6UWZ7 409 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 LZICQ8WZA0 190 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 HSPBAP1Q96EW2 488 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 TIMM22Q9Y584 194 aa14.02□□□□□ -0.17
COL6A1-201ENST00000361866 A0A0J9YYE9 177 aa14.01□□□□□ -0.17
COL6A1-201ENST00000361866 KLF11O14901 512 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms