RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 ZNF556Q9HAH1 456 aa11.71□□□□□ -0.54
CNOT4-203ENST00000361528 DCAF16Q9NXF7 216 aa11.71□□□□□ -0.54
CNOT4-203ENST00000361528 B3GNT2Q9NY97 397 aa11.71□□□□□ -0.54
CNOT4-203ENST00000361528 MRPL39Q9NYK5 338 aaKnown RBP11.71□□□□□ -0.54
CNOT4-203ENST00000361528 GLI3P10071 1580 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 RNF103-CHMP3A0A140T963 221 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 LEUTXA8MZ59 168 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TOR1AO14656 332 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 PI15O43692 258 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SULT1B1O43704 296 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 NDUFS2O75306 463 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CCNE2O96020 404 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 GH2P01242 217 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ALBP02768 609 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 HMGN1P05114 100 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CYP2A7P20853 494 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 DNAJB2P25686 324 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 HTR1BP28222 390 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ZNF76P36508 570 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 UGT2B10P36537 528 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 RGS7P49802 495 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ACTR2P61160 394 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TOP3AQ13472 1001 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CYBRD1Q53TN4 286 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 VWA5B1Q5TIE3 1220 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SDE2Q6IQ49 451 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 LETMD1Q6P1Q0 360 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ZNF600Q6ZNG1 722 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 PLCZ1Q86YW0 608 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 RNF148Q8N7C7 305 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 GTF2H4Q92759 462 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CIDECQ96AQ7 238 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ASIC4Q96FT7 647 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 FBXL20Q96IG2 436 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 OPALINQ96PE5 141 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 PRDM8Q9NQV8 689 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ZC4H2Q9NQZ6 224 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CCM2LQ9NUG4 571 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ADA2Q9NZK5 511 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SARDHQ9UL12 918 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 BAG5Q9UL15 447 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CSNK1G3Q9Y6M4 447 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TNS3Q68CZ2 1445 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TCP10L2B9ZVM9 353 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 USP17L21D6R901 530 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 E7ENX8 843 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TRIM24O15164 1050 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ARHGEF9O43307 516 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ZNF780AO75290 641 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 PRKD3O94806 890 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 GOT2P00505 430 aaKnown RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 PDGFAP04085 211 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 FCGR1AP12314 374 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CD58P19256 250 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CYP3A5P20815 502 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 EVI2BP34910 448 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 GJC1P36383 396 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 GNPDA1P46926 289 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 NPTX2P47972 431 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ATXN3P54252 364 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ADARB1P78563 741 aaKnown RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 GAD2Q05329 585 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CHRNDQ07001 517 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 INCA1Q0VD86 236 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SLC10A2Q12908 348 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 POLD3Q15054 466 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 NIPA1Q7RTP0 329 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 EPHX4Q8IUS5 362 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 DYNC2LI1Q8TCX1 351 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TMC2Q8TDI7 906 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TGFBRAP1Q8WUH2 860 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 LPGAT1Q92604 370 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 DACT3Q96B18 629 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 CENPNQ96H22 339 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ERVMER34-1Q9H9K5 563 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
CNOT4-203ENST00000361528 AGPAT4Q9NRZ5 378 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 MAT2BQ9NZL9 334 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 TMEM216Q9P0N5 145 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 ACTR3BQ9P1U1 418 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 DCDC2Q9UHG0 476 aa11.7□□□□□ -0.54
CNOT4-203ENST00000361528 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
CNOT4-203ENST00000361528 ZNFX1Q9P2E3 1918 aaKnown RBP11.69□□□□□ -0.54
CNOT4-203ENST00000361528 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-203ENST00000361528 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
CNOT4-203ENST00000361528 TOR1BO14657 336 aa11.69□□□□□ -0.54
CNOT4-203ENST00000361528 EDIL3O43854 480 aa11.69□□□□□ -0.54
CNOT4-203ENST00000361528 PLIN3O60664 434 aa11.69□□□□□ -0.54
CNOT4-203ENST00000361528 H2AFYO75367 372 aaKnown RBP11.69□□□□□ -0.54
CNOT4-203ENST00000361528 TIPRLO75663 272 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms