RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SIGLEC10Q96LC7 697 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 EBNA1BP2Q99848 306 aaKnown RBP14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 MGME1Q9BQP7 344 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 FEM1AQ9BSK4 669 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 FICDQ9BVA6 458 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 C2orf49Q9BVC5 232 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 BBS2Q9BXC9 721 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 TRPV4Q9HBA0 871 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SPHK2Q9NRA0 654 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 PLK2Q9NYY3 685 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 UBP1Q9NZI7 540 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 BFARQ9NZS9 450 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SAMD15Q9P1V8 674 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 OR51B4Q9Y5P0 310 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 MAD1L1Q9Y6D9 718 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SMIM23A6NLE4 172 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 HMGB1P1B2RPK0 211 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 NEDD8-MDP1E9PL57 170 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 GALR2O43603 387 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 USP12O75317 370 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 PMPCBO75439 489 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 TCEA3O75764 348 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 MT-CYBP00156 380 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 GLDCP23378 1020 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 GBP2P32456 591 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 NPY2RP49146 381 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 GPX6P59796 221 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 MAXP61244 160 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 ARF5P84085 180 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 DSC2Q02487 901 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 SIGLEC14Q08ET2 396 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 LMAN2Q12907 356 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 SLC14A2Q15849 920 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 FAM78AQ5JUQ0 283 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 AGBL2Q5U5Z8 902 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 CASC4Q6P4E1 433 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 KDELC1Q6UW63 502 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 C3orf62Q6ZUJ4 267 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 DGLUCYQ7Z3D6 616 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 IGDCC3Q8IVU1 814 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 PGBD5Q8N414 524 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 RIBC1Q8N443 379 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 BPIFB1Q8TDL5 484 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 EPS8L3Q8TE67 593 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 ACDQ96AP0 544 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 ALG14Q96F25 216 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 PSKH2Q96QS6 385 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 SEMA3CQ99985 751 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 STMN4Q9H169 189 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 CENPHQ9H3R5 247 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 ZFP14Q9HCL3 533 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 MARK1Q9P0L2 795 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 WNT6Q9Y6F9 365 aa14.03□□□□□ -0.16
PDLIM5-203ENST00000359265 CXorf51AA0A1B0GTR3 108 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 TLDC2A0PJX2 215 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 SNAP91O60641 907 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 ZMPSTE24O75844 475 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 TMCC1O94876 653 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 PGAM1P18669 254 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 CES1P23141 567 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 CD86P42081 329 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 NUMBP49757 651 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 PLK1P53350 603 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 WNT3AP56704 352 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 NIPAL4Q0D2K0 466 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 OLIG2Q13516 323 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 LONRF1Q17RB8 773 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 INO80DQ53TQ3 878 aaPredicted RBP14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 TTMPQ5BVD1 217 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 STEAP4Q687X5 459 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 RETSATQ6NUM9 610 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 MTSS1LQ765P7 747 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 METTL3Q86U44 580 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 TMEM25Q86YD3 366 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 MPP5Q8N3R9 675 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 GSDMBQ8TAX9 411 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 ARRDC2Q8TBH0 407 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 SUSD6Q92537 303 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 ARL8AQ96BM9 186 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 TADA1Q96BN2 335 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 MRGPRX2Q96LB1 330 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 ATP6V1G3Q96LB4 118 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 APOL2Q9BQE5 337 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC2A11Q9BYW1 496 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 IL22Q9GZX6 179 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 POMKQ9H5K3 350 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 ACSS3Q9H6R3 686 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 THG1LQ9NWX6 298 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 DUS2Q9NX74 493 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 SYBUQ9NX95 663 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 FETUBQ9UGM5 382 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 CDH22Q9UJ99 828 aa14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 RALYQ9UKM9 306 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-203ENST00000359265 COL4A3Q01955 1670 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 LOC730098B7Z3J9 87 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 MUSKO15146 869 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms