RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KRT12Q99456 494 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 GBA3Q9H227 469 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 ATP13A3Q9H7F0 1226 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 NOD2Q9HC29 1040 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
TPM1-206ENST00000358278 C1QTNF3-AMACRE9PGA6 284 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 GCATO75600 419 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 LEFTY1O75610 366 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 ALDH1A2O94788 518 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 SERPINF2P08697 491 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 ETS1P14921 441 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 SERPINA4P29622 427 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 CD68P34810 354 aaPredicted RBP15.43■□□□□ 0.06
TPM1-206ENST00000358278 CD86P42081 329 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 CXCL12P48061 93 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 PSMD8P48556 350 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 COPAP53621 1224 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 SATB1Q01826 763 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 PPP1R7Q15435 360 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 ARSIQ5FYB1 569 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 ZNF776Q68DI1 518 aaPredicted RBP15.43■□□□□ 0.06
TPM1-206ENST00000358278 TMEM105Q8N8V8 129 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 HMGB4Q8WW32 186 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 RBM15Q96T37 977 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■□□□ 13.8
TPM1-206ENST00000358278 FAM129BQ96TA1 746 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 MKRN2Q9H000 416 aaKnown RBP15.43■□□□□ 0.06
TPM1-206ENST00000358278 SLC25A51Q9H1U9 297 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 RSPH9Q9H1X1 276 aaPredicted RBP15.43■□□□□ 0.06
TPM1-206ENST00000358278 PCYOX1Q9UHG3 505 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 WASF2Q9Y6W5 498 aa15.43■□□□□ 0.06
TPM1-206ENST00000358278 ZNF318Q5VUA4 2279 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CEP192Q8TEP8 1941 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 PLXND1Q9Y4D7 1925 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.42■□□□□ 0.06
TPM1-206ENST00000358278 CTAGE15A4D2H0 777 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 KPNA3O00505 521 aaPredicted RBP15.42■□□□□ 0.06
TPM1-206ENST00000358278 PIGNO95427 931 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 UGT2B4P06133 528 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CTSLP07711 333 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CTAGE8P0CG41 777 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 PSMB4P28070 264 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 DR1Q01658 176 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 BCL2L1Q07817 233 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 NIPAL4Q0D2K0 466 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CFAP58Q5T655 872 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 ANO7Q6IWH7 933 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 NCEH1Q6PIU2 408 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 KIAA1324Q6UXG2 1013 aaKnown RBP15.42■□□□□ 0.06
TPM1-206ENST00000358278 PRUNE1Q86TP1 453 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CTAGE6Q86UF2 777 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 TMPRSS6Q8IU80 811 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CTAGE4Q8IX94 777 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 PGBD3Q8N328 593 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 GLIS1Q8NBF1 620 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 PIP4K2CQ8TBX8 421 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 IMP4Q96G21 291 aaKnown RBP15.42■□□□□ 0.06
TPM1-206ENST00000358278 LRIG1Q96JA1 1093 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 TUBGCP5Q96RT8 1024 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 OSBPL1AQ9BXW6 950 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CPEB1Q9BZB8 566 aaKnown RBP15.42■□□□□ 0.06
TPM1-206ENST00000358278 PCDH9Q9HC56 1237 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 CD248Q9HCU0 757 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 PAK5Q9P286 719 aa15.42■□□□□ 0.06
TPM1-206ENST00000358278 APBB3O95704 486 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 ADH1BP00325 375 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 KRT14P02533 472 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 DNTTP04053 509 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 ZSCAN5DPP0CG00 497 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 NDUFV2P19404 249 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 CA4P22748 312 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 VPS41P49754 854 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 PRPSAP1Q14558 356 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 TRIP13Q15645 432 aaPredicted RBP15.41■□□□□ 0.06
TPM1-206ENST00000358278 CST6Q15828 149 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 POM121L1PQ3SYA9 428 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 FAM46CQ5VWP2 391 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 TAB3Q8N5C8 712 aaPredicted RBP15.41■□□□□ 0.06
TPM1-206ENST00000358278 TMIEQ8NEW7 156 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 SPATA22Q8NHS9 363 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 ARRDC2Q8TBH0 407 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 PDCD6IPQ8WUM4 868 aaKnown RBP15.41■□□□□ 0.06
TPM1-206ENST00000358278 PRCCQ92733 491 aaPredicted RBP15.41■□□□□ 0.06
TPM1-206ENST00000358278 SIPA1Q96FS4 1042 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 PPP1R16AQ96I34 528 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 MRGPRX1Q96LB2 322 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 PPP1R2P1Q96PQ5 205 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 FCRL5Q96RD9 977 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 SLC6A17Q9H1V8 727 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 DYRK4Q9NR20 520 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 UBP1Q9NZI7 540 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 SARDHQ9UL12 918 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 PPM1HQ9ULR3 514 aa15.41■□□□□ 0.06
TPM1-206ENST00000358278 SPAG17Q6Q759 2223 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 LRRK1Q38SD2 2015 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 GOLGA6CA6NDK9 693 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 GOLGA6BA6NDN3 693 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 LAMTOR5O43504 91 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 ANXA9O76027 345 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 MT-CYBP00156 380 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms