RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 NTSR2O95665 410 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 CTPS1P17812 591 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 PLK1P53350 603 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 PPIDQ08752 370 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 VPS72Q15906 364 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TTC7BQ86TV6 843 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TMEM151BQ8IW70 566 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 ADSSL1Q8N142 457 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 UBR7Q8N806 425 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 Q8N9G6 341 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 OR14C36Q8NHC7 312 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 MTG1Q9BT17 334 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 GRIP1Q9Y3R0 1128 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 FAM187AA6NFU0 413 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 CACNB4O00305 520 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 RAMP2O60895 175 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 SEMA3DO95025 777 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 FDX1P10109 184 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 BMP7P18075 431 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 SLC6A9P48067 706 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TCHHL1Q5QJ38 904 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 HMBOX1Q6NT76 420 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 CXXC5Q7LFL8 322 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 SEMA4BQ9NPR2 832 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 WHRNQ9P202 907 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 PSME2Q9UL46 239 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 CPSF4LA6NMK7 179 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 ALPPL2P10696 532 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ZNF7P17097 686 aaPredicted RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 MAT2AP31153 395 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 IDH2P48735 452 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 VLDLRP98155 873 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 LY6KQ17RY6 165 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 PDPK2PQ6A1A2 396 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 SSX6Q7RTT6 188 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 FBXO39Q8N4B4 442 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 OR2AJ1Q8NGZ0 328 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 RFFLQ8WZ73 363 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 CCDC120Q96HB5 630 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 FAIM2Q9BWQ8 316 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TM6SF2Q9BZW4 377 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 MRTO4Q9UKD2 239 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 SLC27A6Q9Y2P4 619 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KIAA0391O15091 583 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 BUD23O43709 281 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 FAM86B2P0C5J1 330 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 LINGO3P0C6S8 592 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 UQCRC1P31930 480 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■■□□ 16.6
CHD3-202ENST00000358181 HSF2Q03933 536 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KCTD19Q17RG1 926 aaPredicted RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 ARID3BQ8IVW6 561 aaPredicted RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 DNASE1L2Q92874 299 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TMEM168Q9H0V1 697 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KLQ9UEF7 1012 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 A6NCN8 305 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 PRKCHP24723 683 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 USP11P51784 963 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 C2orf76Q3KRA6 126 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 NBPF12Q5TAG4 269 aaPredicted RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 SEL1L3Q68CR1 1132 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 PEX5LQ8IYB4 626 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 RFT1Q96AA3 541 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KCNH7Q9NS40 1196 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 VANGL2Q9ULK5 521 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 GSTK1Q9Y2Q3 226 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 MTO1Q9Y2Z2 717 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 JCADQ9P266 1359 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 A0A1W2PQ72 361 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KCNJ13O60928 360 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 CXCL14O95715 111 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 SRCP12931 536 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 UCHL3P15374 230 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ITGA1P56199 1179 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 POLR2LP62875 67 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 SPIBQ01892 262 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 PRKG2Q13237 762 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TKFCQ3LXA3 575 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 EMBQ6PCB8 327 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ZNF34Q8IZ26 560 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 PROM2Q8N271 834 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ZCCHC10Q8TBK6 192 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ATP6V1G3Q96LB4 118 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TMEM237Q96Q45 408 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 FNDC11Q9BVV2 318 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 EPB41L1Q9H4G0 881 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TBX1O43435 398 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ME2P23368 584 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KCTD21Q4G0X4 260 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ABCA11PQ4W5N1 156 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 XKR6Q5GH73 641 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 EXOC3L1Q86VI1 746 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 SPERTQ8NA61 448 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 RP9Q8TA86 221 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 NSL1Q96IY1 281 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 WDR24Q96S15 920 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TAPBPLQ9BX59 468 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 POMKQ9H5K3 350 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms