RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 NXF1Q9UBU9 619 aaKnown RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SNAP23O00161 211 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 POC5Q8NA72 575 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SIMC1Q8NDZ2 872 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 AXIN2Q9Y2T1 843 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 RIC1Q4ADV7 1423 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 CCDC88CQ9P219 2028 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 FOXD4Q12950 439 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PROX2Q3B8N5 592 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 WDR72Q3MJ13 1102 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 CAPN12Q6ZSI9 719 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 MLPHQ9BV36 600 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 EPB41L4BQ9H329 900 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 C3orf14Q9HBI5 128 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 TMEM260Q9NX78 707 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 BTG4Q9NY30 223 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ARHGAP28Q9P2N2 729 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 N4BP2Q86UW6 1770 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SLC28A1O00337 649 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SGTAO43765 313 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 APOL3O95236 402 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SERPINF2P08697 491 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 HOXD12P35452 270 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 RFX8Q6ZV50 586 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PTF1AQ7RTS3 328 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SLC20A1Q8WUM9 679 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ADGRE3Q9BY15 652 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 TMEM245Q9H330 911 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 FOLH1BQ9HBA9 442 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 USP29Q9HBJ7 922 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 CCDC182A6NF36 153 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 DPM1O60762 260 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 KCNA2P16389 499 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 IST1P53990 364 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 VAC14Q08AM6 782 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 NDUFA9Q16795 377 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ATF7IP2Q5U623 682 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 TAS2R14Q9NYV8 317 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 NUDT5Q9UKK9 219 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 RIMKLBQ9ULI2 386 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 TTLL3Q9Y4R7 772 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PROM1O43490 865 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 OTCP00480 354 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 CYP2D6P10635 497 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 DCAF12L1Q5VU92 463 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 DENND5BQ6ZUT9 1274 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 UBR7Q8N806 425 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 LPGAT1Q92604 370 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 RADILQ96JH8 1075 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ERGIC3Q9Y282 383 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 TBC1D30Q9Y2I9 924 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 HNF4AP41235 474 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 HACD4Q5VWC8 232 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 KDELC2Q7Z4H8 507 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 LRRC52Q8N7C0 313 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 CYP2W1Q8TAV3 490 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 NIFKQ9BYG3 293 aaKnown RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 RAB23Q9ULC3 237 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 FARP1Q9Y4F1 1045 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 PCDHGA4Q9Y5G9 962 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 PRKAR1AP10644 381 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 PSMD8P48556 350 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 SMARCB1Q12824 385 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 EIF4HQ15056 248 aaKnown RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 GPR107Q5VW38 600 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 FOPNLQ96NB1 174 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 SIK2Q9H0K1 926 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 WDCPQ9H6R7 721 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 AAASQ9NRG9 546 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 CISHQ9NSE2 258 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 STK32BQ9NY57 414 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 ORC5O43913 435 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 SLC22A3O75751 556 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 DHFRP00374 187 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 GLUD2P49448 558 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 SIX1Q15475 284 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 ZNF484Q5JVG2 852 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 IQSEC1Q6DN90 963 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 INTS5Q6P9B9 1019 aaKnown RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 UGT2A3Q6UWM9 527 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 UCMAQ8WVF2 138 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 ATP13A1Q9HD20 1204 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 GTSE1Q9NYZ3 720 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 MARCOQ9UEW3 520 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 NR2E1Q9Y466 385 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 C2orf81A6NN90 581 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 SOBPA7XYQ1 873 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 ACOX3O15254 700 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 ZDHHC20Q5W0Z9 365 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 LINC00471Q8N535 108 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 ITFG1Q8TB96 612 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 NR4A3Q92570 626 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 PSD2Q9BQI7 771 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 TRAF4Q9BUZ4 470 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 AHSPQ9NZD4 102 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 SNX9Q9Y5X1 595 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 FTH1P02794 183 aa4.14□□□□□ -1.75
SYNE2-204ENST00000358025 RECQLP46063 649 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-204ENST00000358025 C15orf59Q2T9L4 293 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms