RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ATAT1Q5SQI0 421 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 TRIM68Q6AZZ1 485 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 CES5AQ6NT32 575 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 TRMT10BQ6PF06 316 aaKnown RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 KDELC2Q7Z4H8 507 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 KIAA0907Q7Z7F0 614 aaPredicted RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 RIBC1Q8N443 379 aaPredicted RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.26■□□□□ 0.35
TPM1-205ENST00000357980 FEM1CQ96JP0 617 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 SLC2A11Q9BYW1 496 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 VPS18Q9P253 973 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
TPM1-205ENST00000357980 GGA2Q9UJY4 613 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 FBXO10Q9UK96 956 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 SOX13Q9UN79 622 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 FAM237BA0A1B0GVD1 139 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 MAGEB16A2A368 324 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 POC1B-GALNT4F8VUJ3 575 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 INSIG1O15503 277 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 HOXC11O43248 304 aaPredicted RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 ATP9BO43861 1147 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 EPOP01588 193 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 ATXN1LP0C7T5 689 aaKnown RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 PABPC1P11940 636 aaKnown RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 POU3F3P20264 500 aaPredicted RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 SCNN1BP51168 640 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 MSLNQ13421 630 aaPredicted RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 ADGRE1Q14246 886 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 FCRL3Q96P31 734 aaPredicted RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 TRIB3Q96RU7 358 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 MYADMQ96S97 322 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 PAFAH2Q99487 392 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 KIFC1Q9BW19 673 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 NOVA2Q9UNW9 492 aaKnown RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 FCF1Q9Y324 198 aaKnown RBP17.26■□□□□ 0.35
TPM1-205ENST00000357980 RPS6KL1Q9Y6S9 549 aa17.26■□□□□ 0.35
TPM1-205ENST00000357980 BRWD1Q9NSI6 2320 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 FAM159BA6NKW6 160 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 POLR3GO15318 223 aaPredicted RBP17.25■□□□□ 0.35
TPM1-205ENST00000357980 SMAD6O43541 496 aaKnown RBP17.25■□□□□ 0.35
TPM1-205ENST00000357980 USP1O94782 785 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 POLBP06746 335 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 ADH5P11766 374 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 SLC20A2Q08357 652 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 FRG1Q14331 258 aaKnown RBP17.25■□□□□ 0.35
TPM1-205ENST00000357980 SIRPB2Q5JXA9 342 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 SPANXN3Q5MJ09 141 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 TANGO2Q6ICL3 276 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 RNF135Q8IUD6 432 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 CYP4X1Q8N118 509 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 TTC17Q96AE7 1141 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 ZFYVE19Q96K21 471 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 MSLNLQ96KJ4 702 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 FAM83CQ9BQN1 747 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 SCUBE2Q9NQ36 999 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 CHRAC1Q9NRG0 131 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 SMYD2Q9NRG4 433 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 CLDND1Q9NY35 253 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 HS3ST2Q9Y278 367 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 KIAA1549LQ6ZVL6 1849 aa17.25■□□□□ 0.35
TPM1-205ENST00000357980 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 CXorf49A8MYA2 514 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 ADH1CP00326 375 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ARSAP15289 507 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 CTSOP43234 321 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 MAGOHP61326 146 aaKnown RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 RHOAP61586 193 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 CDK18Q07002 472 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 DMC1Q14565 340 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 POU6F1Q14863 301 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ANKRD20A4Q4UJ75 823 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ARMC3Q5W041 872 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ADGRD1Q6QNK2 874 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 CES3Q6UWW8 571 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 VITQ6UXI7 678 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 METTL3Q86U44 580 aaKnown RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 ADIPOR2Q86V24 386 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 UNC5BQ8IZJ1 945 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 SLC25A41Q8N5S1 370 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 DCAKDQ8WVC6 231 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 SLC44A1Q8WWI5 657 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 STMN4Q9H169 189 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 ZFP14Q9HCL3 533 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 PSMC3IPQ9P2W1 217 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 ZNF821O75541 412 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 HLA-DPA1P20036 260 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 FCHO2Q0JRZ9 810 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 GAB4Q2WGN9 574 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 RALGPS1Q5JS13 557 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 PCID2Q5JVF3 399 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 PKN3Q6P5Z2 889 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 NCEH1Q6PIU2 408 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 NAT16Q8N8M0 369 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ST13P5Q8NFI4 369 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 ATP2A3Q93084 1043 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ZNF669Q96BR6 464 aaPredicted RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 MFSD3Q96ES6 412 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 RIPOR3Q96MK2 946 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 ZNF778Q96MU6 729 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms