RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ATXN2Q99700 1313 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 J3QRK9 145 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 BTN3A3O00478 584 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CLDN4O14493 209 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PLOD3O60568 738 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF189O75820 626 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SLC25A14O95258 325 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 GABRR2P28476 465 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MAN2A2P49641 1150 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SEPHS1P49903 392 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ITGA9Q13797 1035 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 RFX4Q33E94 735 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TOR1AIP1Q5JTV8 583 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CDC42EP5Q6NZY7 148 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ATG14Q6ZNE5 492 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 EIF3MQ7L2H7 374 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 BEND5Q7L4P6 421 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CXXC5Q7LFL8 322 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 METTL3Q86U44 580 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TMEM156Q8N614 296 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CD99L2Q8TCZ2 262 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PRR11Q96HE9 360 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CCNL2Q96S94 520 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CRISPLD1Q9H336 500 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 RSAD1Q9HA92 442 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 GLOD4Q9HC38 313 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 HMG20AQ9NP66 347 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TBX22Q9Y458 520 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 RPRD2Q5VT52 1461 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TRIM64CA6NLI5 447 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 EIF1AYO14602 144 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TM9SF1O15321 606 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 LDB2O43679 373 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 APOC1P02654 83 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SERPINF2P08697 491 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PPP2R2AP63151 447 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 COL9A2Q14055 689 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SLC39A14Q15043 492 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PKN1Q16512 942 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ABCA11PQ4W5N1 156 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PLEKHA7Q6IQ23 1121 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CXorf57Q6NSI4 855 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ISLR2Q6UXK2 745 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 GPR141Q7Z602 305 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 RP9Q8TA86 221 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TBC1D16Q8TBP0 767 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ZHX1-C8orf76Q96EF9 292 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CCDC120Q96HB5 630 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CNDP2Q96KP4 475 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PNPLA8Q9NP80 782 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SEMA4BQ9NPR2 832 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PSMC3IPQ9P2W1 217 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MROH7Q68CQ1 1323 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 C2orf71A6NGG8 1288 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MTHFD1P11586 935 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MAGEA9P43362 315 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 PLK1P53350 603 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 KCNJ2P63252 427 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 GJB7Q6PEY0 223 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TRAPPC6BQ86SZ2 158 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 EXOC3L1Q86VI1 746 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 GAB3Q8WWW8 586 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 LPAR1Q92633 364 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 ASB8Q9H765 288 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 EIF2B3Q9NR50 452 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MRPS33Q9Y291 106 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MAPKBP1O60336 1514 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MSR1P21757 451 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 CHMP24386 653 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 IL12RB1P42701 662 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 AVPR1BP47901 424 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 TUFMP49411 452 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SERPINB8P50452 374 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 LSM3P62310 102 aaKnown RBP5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MBTD1Q05BQ5 628 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 SLC25A25Q6KCM7 469 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 AAGABQ6PD74 315 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 FRRS1Q6ZNA5 592 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 FBXO39Q8N4B4 442 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 C1orf216Q8TAB5 229 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 AP1S3Q96PC3 154 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 KCNK16Q96T55 309 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 HGH1Q9BTY7 390 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 FNDC11Q9BVV2 318 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 MEAF6Q9HAF1 191 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 OPTCQ9UBM4 332 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 GRID1Q9ULK0 1009 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 KCNS2Q9ULS6 477 aa5.85□□□□□ -1.47
BRCA1-203ENST00000357654 H0YGN5 161 aa5.84□□□□□ -1.47
BRCA1-203ENST00000357654 NDUFB10O96000 172 aa5.84□□□□□ -1.47
BRCA1-203ENST00000357654 SERPINA1P01009 418 aa5.84□□□□□ -1.47
BRCA1-203ENST00000357654 SAGP10523 405 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-203ENST00000357654 SRCP12931 536 aa5.84□□□□□ -1.47
BRCA1-203ENST00000357654 MYL9P24844 172 aa5.84□□□□□ -1.47
BRCA1-203ENST00000357654 RBMS1P29558 406 aaKnown RBP5.84□□□□□ -1.47
BRCA1-203ENST00000357654 RPIAP49247 311 aa5.84□□□□□ -1.47
BRCA1-203ENST00000357654 C2orf76Q3KRA6 126 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms