RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LMO2P25791 158 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ATICP31939 592 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 DPP6P42658 865 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 POU5F1BQ06416 359 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 GK5Q6ZS86 529 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 RPS27LQ71UM5 84 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 KCNMB4Q86W47 210 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PCYOX1LQ8NBM8 494 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC35F5Q8WV83 523 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 C18orf25Q96B23 403 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF512Q96ME7 567 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMEM79Q9BSE2 394 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 KLHL25Q9H0H3 589 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PDZD7Q9H5P4 517 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 LRRC40Q9H9A6 602 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 EFCAB1Q9HAE3 211 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PRMT7Q9NVM4 692 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 GPRC5DQ9NZD1 345 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TRIP11Q15643 1979 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 KCNU1A8MYU2 1149 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 VAPBO95292 243 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 TXNP10599 105 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 CHRNB1P11230 501 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 INSRRP14616 1297 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 UGT1A6P19224 532 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 UGT1A1P22309 533 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 UGT1A4P22310 534 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 ACAT1P24752 427 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 UGT1A3P35503 534 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 UGT1A5P35504 534 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 PLK1P53350 603 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 LIMK2P53671 638 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 CDH15P55291 814 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 GRM3Q14832 879 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 STEAP4Q687X5 459 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 CCSAPQ6IQ19 270 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 ITIH5Q86UX2 942 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 CLVS1Q8IUQ0 354 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 OR7G1Q8NGA0 311 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC2A14Q8TDB8 520 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 LRTOMTQ8WZ04 291 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 HPS1Q92902 700 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 TAMM41Q96BW9 452 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 RANBP9Q96S59 729 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 OLFM1Q99784 485 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 IL1RL2Q9HB29 575 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 NCKIPSDQ9NZQ3 722 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 BCAP29Q9UHQ4 241 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 GNPTGQ9UJJ9 305 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 KRBA1A5PL33 1030 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRDX6P30041 224 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 ETFBP38117 255 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 GMPSP49915 693 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 NME5P56597 212 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 ESRRGP62508 458 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 ADIGQ0VDE8 80 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 INSCQ1MX18 579 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 PITRM1Q5JRX3 1037 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 STXBP5Q5T5C0 1151 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 SPERTQ8NA61 448 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 RP9Q8TA86 221 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 NAT9Q9BTE0 207 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC7A5P2Q9GIP4 190 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 COQ10BQ9H8M1 238 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 PDGFCQ9NRA1 345 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 RIMS3Q9UJD0 308 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 CEP350Q5VT06 3117 aa8.33□□□□□ -1.08
CDC42SE1-201ENST00000357235 ATP6AP2A0A1C7CYW4 349 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 NEMP2A6NFY4 417 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 EEF2KO00418 725 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ATP6AP2O75787 350 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SULT1C4O75897 302 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 PARNO95453 639 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 MLNP12872 115 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 TSPAN8P19075 237 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 GLDCP23378 1020 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 JAK1P23458 1154 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SNX16P57768 344 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 TNFAIP2Q03169 654 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 KCNC4Q03721 635 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CTBP1Q13363 440 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 PIGGQ5H8A4 983 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 MTX3Q5HYI7 312 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF618Q5T7W0 954 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 LRRC8EQ6NSJ5 796 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC41A1Q8IVJ1 513 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 RAVER1Q8IY67 606 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 PNPLA1Q8N8W4 532 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CATSPER1Q8NEC5 780 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SUN5Q8TC36 379 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 KBTBD7Q8WVZ9 684 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM49AQ9H0Q0 323 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ASB7Q9H672 318 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms