RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NIPAL1Q6NVV3 410 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 NEPROQ6NW34 567 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 P2RY8Q86VZ1 359 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FAM228AQ86W67 206 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 PLD6Q8N2A8 252 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF607Q96SK3 696 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 EBNA1BP2Q99848 306 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 GPR63Q9BZJ6 419 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.63□□□□□ -1.358e-6■■■□□ 18.6
VPS13B-202ENST00000357162 DPP7Q9UHL4 492 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 JAG2Q9Y219 1238 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FGF1P05230 155 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 BPGMP07738 259 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 TCN1P20061 433 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 IL2P60568 153 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RABL3Q5HYI8 236 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RNF217Q8TC41 542 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ASB9Q96DX5 294 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SLC9A7Q96T83 725 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 TRIM10Q9UDY6 481 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 TRAF6Q9Y4K3 522 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF335Q9H4Z2 1342 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ENTPD5O75356 428 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 VNN2O95498 520 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 EIF2AK2P19525 551 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 DCKP27707 260 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SLC7A1P30825 629 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FKBP1AP62942 108 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 PEX6Q13608 980 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF423Q2M1K9 1284 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FAM220AQ7Z4H9 259 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 TTC16Q8NEE8 873 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 BAP1Q92560 729 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FAM163AQ96GL9 167 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CLIC5Q9NZA1 410 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SLC25A13Q9UJS0 675 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZBTB39O15060 712 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 KPNA6O60684 536 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 BST1Q10588 318 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SEC23AQ15436 765 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 BAIAP2L2Q6UXY1 529 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CCDC185Q8N715 623 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ACTR8Q9H981 624 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 GMPPBQ9Y5P6 360 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RARAP10276 462 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RBM44Q6ZP01 1051 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SMIM5Q71RC9 77 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 LDHDQ86WU2 507 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 MMP27Q9H306 513 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CXorf21Q9HAI6 301 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SARS2Q9NP81 518 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM94Q12767 1356 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SSNA1O43805 119 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RNASEH1O60930 286 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 IL1BP01584 269 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF410Q86VK4 478 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SPATA2LQ8IUW3 424 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CACTIN-AS1Q8N1I8 211 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 OR2B2Q9GZK3 357 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ECE2O60344 883 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 STOMP27105 288 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CCR1P32246 355 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GRIA3P42263 894 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TOB1P50616 345 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 POLR2LP62875 67 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 IFI35P80217 286 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 COQ5Q5HYK3 327 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 LHX5Q9H2C1 402 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MIEF1Q9NQG6 463 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RAB23Q9ULC3 237 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 NR2E1Q9Y466 385 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 C2CD3Q4AC94 2353 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CYP3A7-CYP3A51PA0A087WV96 503 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ABL1P00519 1130 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CYP3A7P24462 503 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CYP2F1P24903 491 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MRPS22P82650 360 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM86AQ8N2M4 240 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 UCMAQ8WVF2 138 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ACTR6Q9GZN1 396 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SEMA6BQ9H3T3 888 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CAB39LQ9H9S4 337 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MROH1Q8NDA8 1641 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GSC2O15499 205 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PRMT3O60678 531 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CYP2A7P20853 494 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 F8A1P23610 371 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MYL9P24844 172 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SCNN1AP37088 669 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 FOXO4P98177 505 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CAMK2GQ13555 558 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 VPS26BQ4G0F5 336 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ADGRD1Q6QNK2 874 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SPATA19Q7Z5L4 167 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 AGBL3Q8NEM8 1001 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PEX13Q92968 403 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ADAMTS10Q9H324 1103 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RETREG1Q9H6L5 497 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CRYL1Q9Y2S2 319 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms