RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ARHGAP36Q6ZRI8 547 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 TXNDC5Q8NBS9 432 aaKnown RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 HSFY1Q96LI6 401 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 MRPL46Q9H2W6 279 aaKnown RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 RRN3Q9NYV6 651 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 CCDC166P0CW27 439 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 NPR3P17342 541 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 CAPRIN1Q14444 709 aaKnown RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 LPIN1Q14693 890 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 LRRC43Q8N309 656 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 CANT1Q8WVQ1 401 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 ZNF560Q96MR9 790 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 CROTQ9UKG9 612 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 A0A0J9YVX5 310 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 SLCO1B7G3V0H7 640 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 PLOD2O00469 737 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 TADA2AO75478 443 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 TFPTP0C1Z6 253 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 NPY2RP49146 381 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 CXCR3P49682 368 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 UGP2Q16851 508 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 OFCC1Q8IZS5 231 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 CENPLQ8N0S6 344 aaPredicted RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 ATPAF2Q8N5M1 289 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 CENPIQ92674 756 aaPredicted RBP13.49□□□□□ -0.25
NCDN-201ENST00000356090 SLC45A3Q96JT2 553 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 GBA3Q9H227 469 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 USP3Q9Y6I4 520 aa13.49□□□□□ -0.25
NCDN-201ENST00000356090 SMIM28A0A1B0GU29 152 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PRORSD1PA6NEY8 169 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PGK1P00558 417 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 CDH2P19022 906 aaPredicted RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 CYP2B6P20813 491 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PLIN5Q00G26 463 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 IKBKEQ14164 716 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 RBM20Q5T481 1227 aaKnown RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 REP15Q6BDI9 236 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 NOTUMQ6P988 496 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 FAM110BQ8TC76 370 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 ZFP42Q96MM3 310 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 SDHDO14521 159 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 LRIG2O94898 1065 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 IGFBP6P24592 240 aaPredicted RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 SLC1A2P43004 574 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 NEDD8Q15843 81 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 ARHGAP17Q68EM7 881 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 SPPL2CQ8IUH8 684 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 CBR4Q8N4T8 237 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 GPR22Q99680 433 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PAIP1Q9H074 479 aaKnown RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 CASS4Q9NQ75 786 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 MCM3APO60318 1980 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 SOCS7O14512 581 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 DAB1O75553 588 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 H6PDO95479 791 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 CD151P48509 253 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 CHST15Q7LFX5 561 aaPredicted RBP13.48□□□□□ -0.25
NCDN-201ENST00000356090 OSTM1Q86WC4 334 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 LSMEM2Q8N112 164 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 SNX27Q96L92 541 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 DUSP16Q9BY84 665 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 SPON1Q9HCB6 807 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 HSFX1Q9UBD0 423 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 DOLKQ9UPQ8 538 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 CRYL1Q9Y2S2 319 aa13.48□□□□□ -0.25
NCDN-201ENST00000356090 PTPRFP10586 1907 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 SNRPB2P08579 225 aaKnown RBP13.47□□□□□ -0.25
NCDN-201ENST00000356090 GABRB3P28472 473 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 ENTPD1P49961 510 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 NDST2P52849 883 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 MAPRE2Q15555 327 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 DCAF4L1Q3SXM0 396 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 CUZD1Q86UP6 607 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 STYXQ8WUJ0 223 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 ZNF696Q9H7X3 374 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 TMEM165Q9HC07 324 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 FBXO5Q9UKT4 447 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 RNF11Q9Y3C5 154 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 PTGDR2Q9Y5Y4 395 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.47□□□□□ -0.25
NCDN-201ENST00000356090 MAGEB16A2A368 324 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 KCNA5P22460 613 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
NCDN-201ENST00000356090 GPR107Q5VW38 600 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms