RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 RSPRY1Q96DX4 576 aa20.78■□□□□ 0.92
TRIM4-202ENST00000354241 ARNT2Q9HBZ2 717 aa20.78■□□□□ 0.92
TRIM4-202ENST00000354241 IL1RAPL1Q9NZN1 696 aa20.78■□□□□ 0.92
TRIM4-202ENST00000354241 ANKRD36A6QL64 1941 aa20.78■□□□□ 0.92
TRIM4-202ENST00000354241 MT-CO1P00395 513 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 CR2P20023 1033 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 WEE1P30291 646 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 HLA-FP30511 346 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 CDK18Q07002 472 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 SEPT6Q14141 434 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 SLC1A5Q15758 541 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 SYCE2Q6PIF2 218 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 CHRDL2Q6WN34 429 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 CYS1Q717R9 158 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 TTC17Q96AE7 1141 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 MFSD3Q96ES6 412 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 NUDCD1Q96RS6 583 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 ZNF576Q9H609 170 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 DUS2Q9NX74 493 aaKnown RBP20.77■□□□□ 0.92
TRIM4-202ENST00000354241 LHX3Q9UBR4 397 aa20.77■□□□□ 0.92
TRIM4-202ENST00000354241 INTS6Q9UL03 887 aaKnown RBP20.77■□□□□ 0.92
TRIM4-202ENST00000354241 LOC285095A0A1B0GVY8 99 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 FAM155BO75949 473 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 NMBRP28336 390 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 SERPINH1P50454 418 aaKnown RBP20.76■□□□□ 0.91
TRIM4-202ENST00000354241 NR1H3Q13133 447 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 SLC12A1Q13621 1099 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 PITRM1Q5JRX3 1037 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 SIRPB2Q5JXA9 342 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 PKN3Q6P5Z2 889 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 SLC26A11Q86WA9 606 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 RASSF3Q86WH2 238 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 CDKL2Q92772 493 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 CERS2Q96G23 380 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 FEM1CQ96JP0 617 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 LMLNQ96KR4 655 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 ASB16Q96NS5 453 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 KIFC1Q9BW19 673 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 FAM169AQ9Y6X4 670 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 K7ERQ8 282 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 UGT1A9O60656 530 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 CES1P23141 567 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 PLK1P53350 603 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 ASTLQ6HA08 431 aaPredicted RBP20.76■□□□□ 0.91
TRIM4-202ENST00000354241 SMARCD2Q92925 531 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 UGT1A7Q9HAW7 530 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 UGT1A10Q9HAW8 530 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 UGT1A8Q9HAW9 530 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 TCAF1Q9Y4C2 921 aa20.76■□□□□ 0.91
TRIM4-202ENST00000354241 ZCWPW2A0A1B0GU75 182 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 ATXN1LP0C7T5 689 aaKnown RBP20.75■□□□□ 0.91
TRIM4-202ENST00000354241 ERVK-10P10266 1014 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 CREB1P16220 341 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 MGAT5Q09328 741 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 GALNT3Q14435 633 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 SLC14A2Q15849 920 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 FUT11Q495W5 492 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 TRIM68Q6AZZ1 485 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 TRABD2AQ86V40 505 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 NAT16Q8N8M0 369 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 ST13P5Q8NFI4 369 aaPredicted RBP20.75■□□□□ 0.91
TRIM4-202ENST00000354241 OSCP1Q8WVF1 389 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 NSMCE3Q96MG7 304 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 ZNF778Q96MU6 729 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 MARK1Q9P0L2 795 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 SLC17A6Q9P2U8 582 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 GGA2Q9UJY4 613 aa20.75■□□□□ 0.91
TRIM4-202ENST00000354241 IQANK1A0A1B0GTG1 560 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 ADRA1DP25100 572 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 EMC10Q5UCC4 262 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 ZNF557Q8N988 423 aaPredicted RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 BPIFB1Q8TDL5 484 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 GDE1Q9NZC3 331 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 SMAD6O43541 496 aaKnown RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 PABPC1P11940 636 aaKnown RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 HLA-DPA1P20036 260 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 CTSOP43234 321 aaPredicted RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 DHCR24Q15392 516 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 ATXN7L2Q5T6C5 722 aaPredicted RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 TTC19Q6DKK2 380 aaPredicted RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 MARK2Q7KZI7 788 aaKnown RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 PTCD2Q8WV60 388 aaKnown RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 TM6SF2Q9BZW4 377 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 TRABDQ9H4I3 376 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 MRM3Q9HC36 420 aaKnown RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 C20orf96Q9NUD7 363 aaPredicted RBP20.74■□□□□ 0.91
TRIM4-202ENST00000354241 ZFATQ9P243 1243 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 CHKBQ9Y259 395 aa20.74■□□□□ 0.91
TRIM4-202ENST00000354241 A0A1W2PPM1 405 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 EPOP01588 193 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 CYP17A1P05093 508 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 FGF1P05230 155 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 BRAFP15056 766 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 NSUN2Q08J23 767 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRIM4-202ENST00000354241 ADAM15Q13444 863 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 EML3Q32P44 896 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 NCEH1Q6PIU2 408 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 EP400NLQ6ZTU2 488 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 MDM1Q8TC05 714 aa20.73■□□□□ 0.91
TRIM4-202ENST00000354241 RPL10LQ96L21 214 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms