RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ASB9Q96DX5 294 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 ZNF419Q96HQ0 510 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 PPP1R10Q96QC0 940 aaKnown RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 FTHL17Q9BXU8 183 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 UBE2OQ9C0C9 1292 aaKnown RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 NCKIPSDQ9NZQ3 722 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 SUCOQ9UBS9 1254 aaKnown RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 APPL1Q9UKG1 709 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 NEU3Q9UQ49 428 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 PDLIM1O00151 329 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 RNASEH2AO75792 299 aaKnown RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 F2P00734 622 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 SLC1A2P43004 574 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 ISLR2Q6UXK2 745 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 CHSY3Q70JA7 882 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 CCDC117Q8IWD4 279 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 SPATA6LQ8N4H0 392 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 CEP70Q8NHQ1 597 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 EDEM1Q92611 657 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 PCED1BQ96HM7 432 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 OMDQ99983 421 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 MRPL57Q9BQC6 102 aaKnown RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 OSBPL2Q9H1P3 480 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 SUDS3Q9H7L9 328 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 PCDHGA7Q9Y5G6 932 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 FAM58BPP0C7Q3 252 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 SULT2A1Q06520 285 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 ESRP1Q6NXG1 681 aaKnown RBP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 CNSTQ6PJW8 725 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 ARHGAP36Q6ZRI8 547 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 FAM156AQ8NDB6 213 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 PPHLN1Q8NEY8 458 aaKnown RBP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 HMGCLL1Q8TB92 370 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 MPP4Q96JB8 637 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 FCRL5Q96RD9 977 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 POMKQ9H5K3 350 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 TCAF1Q9Y4C2 921 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 A0A087X1B8 175 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 MYBPHLA2RUH7 354 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 KCNU1A8MYU2 1149 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 MT-CYBP00156 380 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 C8BP07358 591 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 TAS2R39P59534 338 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 PSME3P61289 254 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 TRIM67Q6ZTA4 783 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 SENP8Q96LD8 212 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 UNKQ9C0B0 810 aaKnown RBP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 GRIP2Q9C0E4 1043 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 OCEL1Q9H607 264 aa24.79■■□□□ 1.56
CPNE1-202ENST00000352393 MRM3Q9HC36 420 aaKnown RBP24.79■■□□□ 1.56
CPNE1-202ENST00000352393 TRIP12Q14669 1992 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-202ENST00000352393 ATP5F1P24539 256 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-202ENST00000352393 KLHDC10Q6PID8 442 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 TAC4Q86UU9 113 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 GALNT4Q8N4A0 578 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 C2CD4AQ8NCU7 369 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-202ENST00000352393 IPMKQ8NFU5 416 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 PTCD2Q8WV60 388 aaKnown RBP24.78■■□□□ 1.56
CPNE1-202ENST00000352393 HEXDCQ8WVB3 486 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 ELMO2Q96JJ3 720 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 FICDQ9BVA6 458 aa24.78■■□□□ 1.56
CPNE1-202ENST00000352393 MRPL1Q9BYD6 325 aaKnown RBP24.78■■□□□ 1.56
CPNE1-202ENST00000352393 ANXA9O76027 345 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 CCNCP24863 283 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 KPNA2P52292 529 aaKnown RBP24.77■■□□□ 1.56
CPNE1-202ENST00000352393 B3GNT6Q6ZMB0 384 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ARHGAP12Q8IWW6 846 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 TOP1MTQ969P6 601 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 MAML3Q96JK9 1138 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 GLOD4Q9HC38 313 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 GTSE1Q9NYZ3 720 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 CACNG4Q9UBN1 327 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 SLC2A6Q9UGQ3 507 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 SARDHQ9UL12 918 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 PADI4Q9UM07 663 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 PTCH2Q9Y6C5 1203 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 STRNO43815 780 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ASLP04424 464 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ZNF26P17031 533 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-202ENST00000352393 TCN1P20061 433 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ADRA1AP35348 466 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 CD151P48509 253 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ADAM17P78536 824 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 MYLK3Q32MK0 819 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 PABPC1LQ4VXU2 614 aaKnown RBP24.77■■□□□ 1.56
CPNE1-202ENST00000352393 IL23RQ5VWK5 629 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ZFP42Q96MM3 310 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 PRPF18Q99633 342 aaKnown RBP24.77■■□□□ 1.56
CPNE1-202ENST00000352393 IL12RB2Q99665 862 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 IGSF5Q9NSI5 407 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 TREX1Q9NSU2 369 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 ADA2Q9NZK5 511 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 EPS15L1Q9UBC2 864 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 TANC1Q9C0D5 1861 aa24.77■■□□□ 1.56
CPNE1-202ENST00000352393 MYOCOSA0A1B0GUC4 107 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 POTEHQ6S545 545 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 CHERPQ8IWX8 916 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms