RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 CPA5Q8WXQ8 436 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NDRG1Q92597 394 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 FAM167AQ96KS9 214 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 C1orf21Q9H246 121 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 EXOSC4Q9NPD3 245 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 KLHL11Q9NVR0 708 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.05□□□□□ -1.441e-6■□□□□ 8.6
RFC1-201ENST00000349703 HCFC1R1Q9NWW0 138 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 AIPL1Q9NZN9 384 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 BFARQ9NZS9 450 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SH3BP4Q9P0V3 963 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 DLGAP2Q9P1A6 1054 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ASIC3Q9UHC3 531 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GDF2Q9UK05 429 aaPredicted RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 ERVK-11Q9UQG0 969 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 KCNK5O95279 499 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SDHBP21912 280 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 KCNA3P22001 575 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GRIA2P42262 883 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 RPIAP49247 311 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NFE2L1Q14494 772 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 HSDL1Q3SXM5 330 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 AGKQ53H12 422 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CAVIN4Q5BKX8 364 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NHSL2Q5HYW2 709 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ATAD3BQ5T9A4 648 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 AMIGO1Q86WK6 493 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CDKN2AIPNLQ96HQ2 116 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SSX3Q99909 188 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ZNF416Q9BWM5 594 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 AGPAT5Q9NUQ2 364 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 KDM3AQ9Y4C1 1321 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 EDDM13A0A1B0GTR0 161 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 PVALEFA0A1B0GWK0 134 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 TCP10L2B9ZVM9 353 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 E5RGE8 158 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 EEF2KO00418 725 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 CHD1O14646 1710 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ACSL4O60488 711 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SIN3BO75182 1162 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GLI1P08151 1106 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 TMEM225BP0DP42 221 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ZFXP17010 805 aaPredicted RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 DRD4P21917 467 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CHRNA3P32297 505 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SLC1A4P43007 532 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 MMP16P51512 607 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NUDT6P53370 316 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 RPS8P62241 208 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 COG7P83436 770 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SLC18A3Q16572 532 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 MAEAQ7L5Y9 396 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CHST15Q7LFX5 561 aaPredicted RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 TAS2R42Q7RTR8 314 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 LYSMD2Q8IV50 215 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 BRSK2Q8IWQ3 736 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 LRRC34Q8IZ02 419 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 TGS1Q96RS0 853 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 SLC38A3Q99624 504 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GORASP1Q9BQQ3 440 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 C17orf80Q9BSJ5 609 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CCDC28BQ9BUN5 200 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 RNF32Q9H0A6 362 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 TMEM168Q9H0V1 697 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NKIRAS2Q9NYR9 191 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 DKK3Q9UBP4 350 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GRHPRQ9UBQ7 328 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 BCAP29Q9UHQ4 241 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 HAO1Q9UJM8 370 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 COPS3Q9UNS2 423 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 C19orf53Q9UNZ5 99 aaPredicted RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 NSG2Q9Y328 171 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CAPN6Q9Y6Q1 641 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 MIF4GDA9UHW6 222 aaKnown RBP6.04□□□□□ -1.44
RFC1-201ENST00000349703 J3QL48 77 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 LRRN2O75325 713 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 NTRK1P04629 796 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 ASGR2P07307 311 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 PFKMP08237 780 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 RNH1P13489 461 aaKnown RBP6.04□□□□□ -1.44
RFC1-201ENST00000349703 CASP1P29466 404 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 GPD2P43304 727 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 GJA9P57773 515 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 SLC39A6Q13433 755 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 GAB1Q13480 694 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 BOP1Q14137 746 aaKnown RBP6.04□□□□□ -1.44
RFC1-201ENST00000349703 RPE65Q16518 533 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 ERMARDQ5T6L9 678 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 ATF7IP2Q5U623 682 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 IYDQ6PHW0 289 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 CHST9Q7L1S5 443 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 KIRREL3Q8IZU9 778 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 BATF2Q8N1L9 274 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 AGAP11Q8TF27 550 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 U2AF1L4Q8WU68 220 aaKnown RBP6.04□□□□□ -1.44
RFC1-201ENST00000349703 LENG1Q96BZ8 264 aaPredicted RBP6.04□□□□□ -1.44
RFC1-201ENST00000349703 PGM2Q96G03 612 aa6.04□□□□□ -1.44
RFC1-201ENST00000349703 MS4A14Q96JA4 679 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms