RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TPCN2Q8NHX9 752 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 EXOC2Q96KP1 924 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 RNF157Q96PX1 679 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 PSKH2Q96QS6 385 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 LACRTQ9GZZ8 138 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 GOLPH3Q9H4A6 298 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 TM9SF3Q9HD45 589 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 FSCN3Q9NQT6 498 aa22.4■■□□□ 1.18
SNX3-202ENST00000349379 CDV3Q9UKY7 258 aaKnown RBP22.4■■□□□ 1.18
SNX3-202ENST00000349379 LRRD1A4D1F6 860 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 ARHGAP33O14559 1287 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 PSTPIP1O43586 416 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 AP1G1O43747 822 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 UGT2B4P06133 528 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 ID4P47928 161 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 NSUN2Q08J23 767 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNX3-202ENST00000349379 SLC10A7Q0GE19 358 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 PUM1Q14671 1186 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNX3-202ENST00000349379 LBRQ14739 615 aaKnown RBP22.39■■□□□ 1.17
SNX3-202ENST00000349379 GDPD4Q6W3E5 623 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 ATPAF2Q8N5M1 289 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 CALR3Q96L12 384 aaKnown RBP22.39■■□□□ 1.17
SNX3-202ENST00000349379 RTKNQ9BST9 563 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 TMEM9BQ9NQ34 198 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 DDX56Q9NY93 547 aaKnown RBP22.39■■□□□ 1.17
SNX3-202ENST00000349379 DKK3Q9UBP4 350 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 DNAH14Q0VDD8 3507 aa22.39■■□□□ 1.17
SNX3-202ENST00000349379 C16orf96A6NNT2 1141 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 GOLGA6L6A8MZA4 724 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 TM4SF5O14894 197 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 MUSKO15146 869 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 SPOPO43791 374 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 NUDT1P36639 197 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 ABL2P42684 1182 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 GRIA4P48058 902 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 GSDMDP57764 484 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 RACK1P63244 317 aaKnown RBP22.38■■□□□ 1.17
SNX3-202ENST00000349379 BNC1Q01954 994 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 GRIK2Q13002 908 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 GRM3Q14832 879 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 TAZQ16635 292 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 RAB7BQ96AH8 199 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 KLHL32Q96NJ5 620 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 CINPQ9BW66 212 aaPredicted RBP22.38■■□□□ 1.17
SNX3-202ENST00000349379 ZDHHC5Q9C0B5 715 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 SEPT3Q9UH03 358 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 FADS3Q9Y5Q0 445 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 DUSP10Q9Y6W6 482 aa22.38■■□□□ 1.17
SNX3-202ENST00000349379 CABIN1Q9Y6J0 2220 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 TSPAN11A1L157 253 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 SPINT1O43278 529 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 SYPP08247 313 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 CR2P20023 1033 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 GARSP41250 739 aaKnown RBP22.37■■□□□ 1.17
SNX3-202ENST00000349379 AFF3P51826 1226 aaKnown RBP22.37■■□□□ 1.17
SNX3-202ENST00000349379 GBE1Q04446 702 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 SLC10A2Q12908 348 aaPredicted RBP22.37■■□□□ 1.17
SNX3-202ENST00000349379 ZFYVE27Q5T4F4 411 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 SLC9A4Q6AI14 798 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 FBXL19Q6PCT2 694 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 PLD5Q8N7P1 536 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 HCAR2Q8TDS4 363 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 FATE1Q969F0 183 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 SLC6A18Q96N87 628 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 TSGA13Q96PP4 275 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 TUBGCP5Q96RT8 1024 aa22.37■■□□□ 1.17
SNX3-202ENST00000349379 RNGTTO60942 597 aaKnown RBP22.36■■□□□ 1.17
SNX3-202ENST00000349379 KRT1P04264 644 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 HSPA9P38646 679 aaKnown RBP22.36■■□□□ 1.17
SNX3-202ENST00000349379 RENBPP51606 427 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 TMEM259Q4ZIN3 620 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 SRLQ86TD4 932 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 PRPF39Q86UA1 669 aaKnown RBP22.36■■□□□ 1.17
SNX3-202ENST00000349379 HORMAD1Q86X24 394 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 PGBD5Q8N414 524 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 TEX26Q8N6G2 289 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 MAML1Q92585 1016 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 NSMCE3Q96MG7 304 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 ZNF641Q96N77 438 aaPredicted RBP22.36■■□□□ 1.17
SNX3-202ENST00000349379 MGME1Q9BQP7 344 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 DTLQ9NZJ0 730 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 ZFR2Q9UPR6 939 aaKnown RBP22.36■■□□□ 1.17
SNX3-202ENST00000349379 DMTF1Q9Y222 760 aa22.36■■□□□ 1.17
SNX3-202ENST00000349379 A0A1W2PQU0 124 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 A0A1W2PR77 199 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 C4orf47A7E2U8 309 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 AREL1O15033 823 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 GJB3O75712 270 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 PIGNO95427 931 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 CSNK1EP49674 416 aaKnown RBP22.35■■□□□ 1.17
SNX3-202ENST00000349379 ZNF284Q2VY69 593 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 NAPEPLDQ6IQ20 393 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 MFSD7Q6UXD7 560 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 HDAC11Q96DB2 347 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 SUV39H2Q9H5I1 410 aa22.35■■□□□ 1.17
SNX3-202ENST00000349379 PCNX2A6NKB5 2137 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 A0A1B0GVT2 93 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 WNT9AO14904 365 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 MAP3K6O95382 1288 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 MAT2AP31153 395 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms