RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 SPATA17Q96L03 361 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 FBXO5Q9UKT4 447 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 A0A1W2PRU2 124 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 CXCL14O95715 111 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 SERPINF2P08697 491 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 RALBP11234 206 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 CNTFP26441 200 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 CCR10P46092 362 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 NCALDP61601 193 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 SERINC3Q13530 473 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 VWA5B1Q5TIE3 1220 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 DENND5AQ6IQ26 1287 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 OR13C4Q8NGS5 318 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 TMEM106CQ9BVX2 250 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 DCDC2Q9UHG0 476 aa17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 AGO1Q9UL18 857 aaKnown RBP17.35■□□□□ 0.37
SMARCC2-202ENST00000347471 CCL16O15467 120 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 TIMM44O43615 452 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 OAS1P00973 400 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 HMGA1P17096 107 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 RGRP47804 291 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 KDSRQ06136 332 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 SIRPB2Q5JXA9 342 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 RBM20Q5T481 1227 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 SLC39A11Q8N1S5 342 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 PNPOQ9NVS9 261 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 SAGE1Q9NXZ1 904 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 PRSS56P0CW18 603 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 ARSDP51689 593 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 SMARCB1Q12824 385 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 USP4Q13107 963 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 TMCO4Q5TGY1 634 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 TRIM42Q8IWZ5 723 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 TMA16Q96EY4 203 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 OXCT2Q9BYC2 517 aaPredicted RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 NOD2Q9HC29 1040 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 TYW5A2RUC4 315 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 A8MUI8 341 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 TBC1D4O60343 1298 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 FGF18O76093 207 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 ENO1P06733 434 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 NCF2P19878 526 aaPredicted RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 HOXC13P31276 330 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 E2F5Q15329 346 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 CES4AQ5XG92 561 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 DNAJC1Q96KC8 554 aaKnown RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 EBF4Q9BQW3 602 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 ZNF334Q9HCZ1 680 aaPredicted RBP17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 MAN1C1Q9NR34 630 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 INSL5Q9Y5Q6 135 aa17.34■□□□□ 0.37
SMARCC2-202ENST00000347471 FSBPO95073 299 aa17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 MZF1P28698 734 aaPredicted RBP17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 SLC1A6P48664 564 aa17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 MNX1P50219 401 aaPredicted RBP17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 KPNA1P52294 538 aaPredicted RBP17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 SLC18A1P54219 525 aa17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 IHHQ14623 411 aa17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 NMRAL1Q9HBL8 299 aa17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 FCF1Q9Y324 198 aaKnown RBP17.33■□□□□ 0.37
SMARCC2-202ENST00000347471 GOLGA8QA0A0J9YX86 632 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 GOLGA8OA6NCC3 632 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 GOLGA8NF8WBI6 632 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 CNPP09543 421 aaKnown RBP17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 STMN1P16949 149 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 WEE1P30291 646 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 SLC8A1P32418 973 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 CDK18Q07002 472 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 ATXN7L2Q5T6C5 722 aaPredicted RBP17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 SARS2Q9NP81 518 aaKnown RBP17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 PRKAG3Q9UGI9 489 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 HEATR9A2RTY3 570 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 GABRB3P28472 473 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 CD151P48509 253 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 TAS2R39P59534 338 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 PARP15Q460N3 678 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 SNX30Q5VWJ9 437 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 RANBP10Q6VN20 620 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 ZNF276Q8N554 614 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 PDZD8Q8NEN9 1154 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 MRPS31Q92665 395 aaKnown RBP17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 PRICKLE1Q96MT3 831 aaPredicted RBP17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 EMCNQ9ULC0 261 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 SH3BP1Q9Y3L3 701 aa17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 HBS1LQ9Y450 684 aaKnown RBP17.33■□□□□ 0.36
SMARCC2-202ENST00000347471 NEMP2A6NFY4 417 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 ABL2P42684 1182 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 RNF43Q68DV7 783 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 NXNQ6DKJ4 435 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 POTEHQ6S545 545 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 ZC3HC1Q86WB0 502 aaKnown RBP17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 WDR75Q8IWA0 830 aaKnown RBP17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 CCDC117Q8IWD4 279 aaPredicted RBP17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 GBP7Q8N8V2 638 aaPredicted RBP17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 KLHL23Q8NBE8 558 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 NXNL1Q96CM4 212 aa17.32■□□□□ 0.36
SMARCC2-202ENST00000347471 IMP4Q96G21 291 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms