RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SLC35G4P0C7Q5 338 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 SP3Q02447 781 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 SPIRE1Q08AE8 756 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 NTRK3Q16288 839 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 BTN2A1Q7KYR7 527 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 ZNF248Q8NDW4 579 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 BRD9Q9H8M2 597 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 IL12RB1P42701 662 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 MTMR8Q96EF0 704 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 SAR1AQ9NR31 198 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 CCDC166P0CW27 439 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 ATP4AP20648 1035 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 DCLRE1AQ6PJP8 1040 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 INTS7Q9NVH2 962 aaKnown RBP23.3■■□□□ 1.32
NPAS3-201ENST00000346562 DDX20Q9UHI6 824 aaKnown RBP23.3■■□□□ 1.32
NPAS3-201ENST00000346562 DDX3XO00571 662 aaKnown RBP eCLIP23.29■■□□□ 1.32
NPAS3-201ENST00000346562 RHAGQ02094 409 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 FBXO30Q8TB52 745 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 C1orf232A0A0U1RR37 186 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 AGRPO00253 132 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 NDUFV1P49821 464 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 CACNA2D1P54289 1103 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 PSMD5Q16401 504 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 FAAH2Q6GMR7 532 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 BPIFA1Q9NP55 256 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 USP20Q9Y2K6 914 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 DIP2BQ9P265 1576 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 NR2F1P10589 423 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 RCVRNP35243 200 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 ETNPPLQ8TBG4 499 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 SLC4A5Q9BY07 1137 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 LEF1Q9UJU2 399 aaPredicted RBP23.29■■□□□ 1.32
NPAS3-201ENST00000346562 F8VP50 259 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 MAFO75444 373 aaPredicted RBP23.29■■□□□ 1.32
NPAS3-201ENST00000346562 ERBB2P04626 1255 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 ST3GAL1Q11201 340 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 POM121L1PQ3SYA9 428 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 PPP1R15BQ5SWA1 713 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 POU5F2Q8N7G0 328 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 SLIT1O75093 1534 aa23.29■■□□□ 1.32
NPAS3-201ENST00000346562 ISM1B1AKI9 464 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 PTGES3LE9PB15 166 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 DNTTP04053 509 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 S100GP29377 79 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 CDC25CP30307 473 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 GRM3Q14832 879 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 KLHL35Q6PF15 583 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 RASAL3Q86YV0 1011 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 SIX5Q8N196 739 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 GIT1Q9Y2X7 761 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 MTF2Q9Y483 593 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-201ENST00000346562 AK9Q5TCS8 1911 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 FAM171BQ6P995 826 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 BHLHE22Q8NFJ8 381 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-201ENST00000346562 ZNF780BQ9Y6R6 833 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 ATP5F1P24539 256 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-201ENST00000346562 PLPPR4Q7Z2D5 763 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 UBASH3BQ8TF42 649 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 CD101Q93033 1021 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 GDF3Q9NR23 364 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 MRTO4Q9UKD2 239 aaKnown RBP23.28■■□□□ 1.32
NPAS3-201ENST00000346562 GJB6O95452 261 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 CCNYL3P0C7X3 344 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 AP5B1Q2VPB7 878 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 MZT2BQ6NZ67 158 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 HEXDCQ8WVB3 486 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 PRDM8Q9NQV8 689 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 PTCH2Q9Y6C5 1203 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 RPTORQ8N122 1335 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 GLRA2P23416 452 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 CRYBB1P53674 252 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-201ENST00000346562 MAMLD1Q13495 774 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 C15orf59Q2T9L4 293 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-201ENST00000346562 SEMA6AQ9H2E6 1030 aa23.28■■□□□ 1.32
NPAS3-201ENST00000346562 EML1O00423 815 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 LSM12Q3MHD2 195 aaKnown RBP23.27■■□□□ 1.32
NPAS3-201ENST00000346562 CLVS1Q8IUQ0 354 aaPredicted RBP23.27■■□□□ 1.32
NPAS3-201ENST00000346562 MAT2BQ9NZL9 334 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 OFCC1Q8IZS5 231 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 TMPRSS4Q9NRS4 437 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 ULK1O75385 1050 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 OTCP00480 354 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 TSHRP16473 764 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 KELP23276 732 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 LRRC38Q5VT99 294 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 NPNTQ6UXI9 565 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 TMC5Q6UXY8 1006 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 PROSER1Q86XN7 944 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 SLC9A7Q96T83 725 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 DDX4Q9NQI0 724 aaKnown RBP23.27■■□□□ 1.32
NPAS3-201ENST00000346562 L1RE1Q9UN81 338 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 SULT2A1Q06520 285 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 TNK2Q07912 1038 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 TRIM63Q969Q1 353 aa23.27■■□□□ 1.32
NPAS3-201ENST00000346562 A0A087WXM4 84 aa23.27■■□□□ 1.31
NPAS3-201ENST00000346562 TLL1O43897 1013 aa23.27■■□□□ 1.31
NPAS3-201ENST00000346562 UGT2B15P54855 530 aa23.27■■□□□ 1.31
NPAS3-201ENST00000346562 CCL23P55773 120 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms