RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ABATP80404 500 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 PABPC1LQ4VXU2 614 aaKnown RBP12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 OR56A4Q8NGH8 313 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 FAM126AQ9BYI3 521 aaPredicted RBP12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 LRRC7Q96NW7 1537 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 GOLGA4Q13439 2230 aaKnown RBP12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 HMGCRP04035 888 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 PTPN5P54829 565 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 ATAT1Q5SQI0 421 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 PHF19Q5T6S3 580 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 PLA2G12BQ9BX93 195 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 KANSL1LA0AUZ9 987 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 SLC25A14O95258 325 aaPredicted RBP12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 FAM228BP0C875 321 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 CES1P23141 567 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 PSMD5Q16401 504 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 C5orf34Q96MH7 638 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 SPATA9Q9BWV2 254 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 CCDC177Q9NQR7 707 aaPredicted RBP12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 BTRCQ9Y297 605 aa12.35□□□□□ -0.43
TRIOBP-202ENST00000344404 SERPINA3P01011 423 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 KCNA5P22460 613 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 INHBEP58166 350 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 IKBIPQ70UQ0 350 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ADGRG6Q86SQ4 1221 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PSMD13Q9UNM6 376 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ZNF536O15090 1300 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 FOXP2O15409 715 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 FASP25445 335 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 HECTD3Q5T447 861 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 QKIQ96PU8 341 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 APOL4Q9BPW4 351 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 TIMM8BQ9Y5J9 83 aaPredicted RBP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 CD163L1Q9NR16 1453 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 E5RJQ4 531 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PLOD3O60568 738 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 INHAP05111 366 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 TIE1P35590 1138 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 RAD23AP54725 363 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 LRRC73Q5JTD7 316 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 HYIQ5T013 277 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 CCNI2Q6ZMN8 369 aaPredicted RBP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 MBD2Q9UBB5 411 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 SPEF1Q9Y4P9 236 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 DISP2A7MBM2 1401 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 BCL10O95999 233 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 MAD2L1Q13257 205 aaPredicted RBP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PAGE2BQ5JRK9 111 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 XRRA1Q6P2D8 792 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 DEF8Q6ZN54 512 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 LPCAT2Q7L5N7 544 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 RUBCNQ92622 972 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 CPED1A4D0V7 1026 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 IQCF5A8MTL0 148 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 EPHX1P07099 455 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PPM1AP35813 382 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ACSM2AQ08AH3 577 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 KCTD21Q4G0X4 260 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ACSM2BQ68CK6 577 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 LIN54Q6MZP7 749 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ARHGEF19Q8IW93 802 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 OR10H5Q8NGA6 315 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 COPG2Q9UBF2 871 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 SLC28A2O43868 658 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 RABGGTBP53611 331 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ZNF846Q147U1 533 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 GPR135Q8IZ08 494 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 HTR3CQ8WXA8 447 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 NKD1Q969G9 470 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 POLR1EQ9GZS1 481 aaKnown RBP12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 PSME2Q9UL46 239 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 TRPM1Q7Z4N2 1603 aa12.34□□□□□ -0.43
TRIOBP-202ENST00000344404 SLC31A1O15431 190 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 CHRNGP07510 517 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 MYBL2P10244 700 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 PIK3CGP48736 1102 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 TAS2R41P59536 307 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 CCINQ13939 588 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 ZIK1Q3SY52 487 aaPredicted RBP12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 C2orf27AQ580R0 203 aa12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.33□□□□□ -0.43
TRIOBP-202ENST00000344404 GCNT7Q6ZNI0 430 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms