RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CFAP99D6REC4 459 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 CYB561D2O14569 222 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 RRP8O43159 456 aaKnown RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 TSPAN6O43657 245 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ZBED1O96006 694 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 FTH1P19P0C7X4 201 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 CKMT1AP12532 417 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 GABRG2P18507 467 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 LRP8Q14114 963 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ARL13BQ3SXY8 428 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ZCWPW2Q504Y3 356 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 RALGPS1Q5JS13 557 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 BTBD8Q5XKL5 378 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ZNF574Q6ZN55 896 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 LRRC74BQ6ZQY2 392 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 NELFCDQ8IXH7 590 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 MYO1HQ8N1T3 1032 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ZNF248Q8NDW4 579 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 TTC8Q8TAM2 541 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 PLEKHO2Q8TD55 490 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 CEP63Q96MT8 703 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 RPP25Q9BUL9 199 aaKnown RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 HDAC8Q9BY41 377 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 KLHL11Q9NVR0 708 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 CAPN11Q9UMQ6 739 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 SRPRBQ9Y5M8 271 aaKnown RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 DUSP10Q9Y6W6 482 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 SH3PXD2BA1X283 911 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 C2orf72A6NCS6 295 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 SLC16A3O15427 465 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 B4GALT5O43286 388 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 GOSR1O95249 250 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 UBTFL6P0CB48 400 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 CPB1P15086 417 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 GOT1P17174 413 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 ATF4P18848 351 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 SLC34A1Q06495 639 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 BFSP1Q12934 665 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 E2F2Q14209 437 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 ZNF438Q7Z4V0 828 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 PATL1Q86TB9 770 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 OR2T34Q8NGX1 318 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 OR10T2Q8NGX3 314 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 AUTS2Q8WXX7 1259 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 PRMT1Q99873 361 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 DENND2DQ9H6A0 471 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 PARVBQ9HBI1 364 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 SRA1Q9HD15 236 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 SMARCAL1Q9NZC9 954 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 ATXN7L1Q9ULK2 861 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 TDRKHQ9Y2W6 561 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 NT5C1B-RDH14C9J2C7 533 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 ADAM23O75077 832 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 UBL4AP11441 157 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 POLR2EP19388 210 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 MASP1P48740 699 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 CLCNKAP51800 687 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 YPEL5P62699 121 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 GRM3Q14832 879 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 KRT31Q15323 416 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 DUOXA2Q1HG44 320 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 SPDYAQ5MJ70 313 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 ERAP2Q6P179 960 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 LRRC69Q6ZNQ3 347 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 SPATA2LQ8IUW3 424 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 KBTBD7Q8WVZ9 684 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 PGAP3Q96FM1 320 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 NSMCE3Q96MG7 304 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 LHX5Q9H2C1 402 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 ZMAT5Q9UDW3 170 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 GGT7Q9UJ14 662 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 AGO2Q9UKV8 859 aaKnown RBP7.45□□□□□ -1.22
ZNF540-202ENST00000343599 TMEM131Q92545 1883 aa7.45□□□□□ -1.22
ZNF540-202ENST00000343599 MYO10Q9HD67 2058 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 BDP1A6H8Y1 2624 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 C3orf80F5H4A9 247 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 FGFR1OPO95684 399 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TNNC2P02585 160 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 EIF2S1P05198 315 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 PLA2G4BP0C869 781 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 C6P13671 934 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 C5AR1P21730 350 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 CSNK1DP48730 415 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TMED10P49755 219 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 LIG4P49917 911 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 FOXK1P85037 733 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SPCS2Q15005 226 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TRADDQ15628 312 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SLC14A2Q15849 920 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 KRT71Q3SY84 523 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 KIAA1161Q6NSJ0 714 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 DENND5BQ6ZUT9 1274 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 ANKS1BQ7Z6G8 1248 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TCEAL4Q96EI5 215 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 DNAJC1Q96KC8 554 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms